Cluster: MurphyR_2019_SRR7351979_bin.5_CGC22
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: MurphyR_2019_SRR7351979_bin.5
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7351979_bin.5_k141_75334 | MurphyR_2019_SRR7351979_bin.5_k141_75334_17 | 19261 | 20730 | - | 2.A.66.2.2 |
| NULL(UNKNOWN) | MurphyR_2019_SRR7351979_bin.5_k141_75334 | MurphyR_2019_SRR7351979_bin.5_k141_75334_18 | 20720 | 21802 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MurphyR_2019_SRR7351979_bin.5_k141_75334 | MurphyR_2019_SRR7351979_bin.5_k141_75334_19 | 21860 | 23020 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MurphyR_2019_SRR7351979_bin.5_k141_75334 | MurphyR_2019_SRR7351979_bin.5_k141_75334_20 | 23017 | 23913 | - | GT2 |
| CAZyme | MurphyR_2019_SRR7351979_bin.5_k141_75334 | MurphyR_2019_SRR7351979_bin.5_k141_75334_21 | 23913 | 24680 | - | GT32 |
| pfam | MurphyR_2019_SRR7351979_bin.5_k141_75334 | MurphyR_2019_SRR7351979_bin.5_k141_75334_22 | 24685 | 25170 | - | Glyco_tran_28_C |
| pfam | MurphyR_2019_SRR7351979_bin.5_k141_75334 | MurphyR_2019_SRR7351979_bin.5_k141_75334_23 | 25182 | 25649 | - | Alg14 |
| TC | MurphyR_2019_SRR7351979_bin.5_k141_75334 | MurphyR_2019_SRR7351979_bin.5_k141_75334_24 | 25650 | 26414 | - | 9.B.18.1.2 |
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_75334_17
Type: TC
Location: 19261 - 20730 (-)
Type: TC
Location: 19261 - 20730 (-)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_75334_18
Type:
Location: 20720 - 21802 (-)
Type:
Location: 20720 - 21802 (-)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_75334_19
Type:
Location: 21860 - 23020 (-)
Type:
Location: 21860 - 23020 (-)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_75334_20
Type: CAZyme
Location: 23017 - 23913 (-)
Type: CAZyme
Location: 23017 - 23913 (-)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_75334_21
Type: CAZyme
Location: 23913 - 24680 (-)
Type: CAZyme
Location: 23913 - 24680 (-)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_75334_22
Type: pfam
Location: 24685 - 25170 (-)
Type: pfam
Location: 24685 - 25170 (-)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_75334_23
Type: pfam
Location: 25182 - 25649 (-)
Type: pfam
Location: 25182 - 25649 (-)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_75334_24
Type: TC
Location: 25650 - 26414 (-)
Type: TC
Location: 25650 - 26414 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.