PROTEIN: MurphyR_2019_SRR7351979_bin.5_k141_75334_18
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Protein File & Metadata
Source:
MurphyR_2019_SRR7351979_bin.5_k141_75334_18.pdb
Genome ID:
Protein ID:
MurphyR_2019_SRR7351979_bin.5_k141_75334_18
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Protein Sequence
MSQEISYSSS EGNFAPVAIT TLSRIECLKT TIDSLGRCHC AEYTDVYISV DYPPNTKYKS 60 GYVEVCNYLN TIHDDHPFKS LNLYFHKANL GPFENYLWLV RLILSKYNSI IILEDDNEPA 120 PCFLDFCNKG LQIYATDNDV VVINPSDYVW CGDGYTPLLR SINTDDCNTE KRQMLWHGMA 180 SWSECILPYY NFVLDQSILS IGDHPSALLK LFKRSKTLCY QYLKDTYNTR AKAPWHNGRL 240 YSIDMTWDVA MIVFDKVAIC PIENLQRDLG VVGNGHSFTK AFSNSAELQN RKLKEEPEFD 300 FVNPQDAALN MDELILHDKF QSKPWWKWAF LITGYLAKYL QRKLTGKSQK LINPWSENDK 360
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4D3G6-F1-model_v4 | 8 | 351 | 60 | 381 | 0.6368 |
0.7427 |
| AF-Q4DMC0-F1-model_v4 | 8 | 353 | 61 | 381 | 0.6357 |
0.7428 |
| AF-A0A3P7DV18-F1-model_v4 | 8 | 311 | 41 | 300 | 0.6184 |
0.7923 |
| AF-A0A3P7Q5X9-F1-model_v4 | 1 | 323 | 20 | 346 | 0.608 |
0.6815 |
| AF-A0A044SGH9-F1-model_v4 | 2 | 333 | 1 | 421 | 0.5822 |
0.6903 |
| AF-A0A0R0E9B2-F1-model_v4 | 9 | 334 | 4 | 311 | 0.5806 |
0.6933 |
| AF-A0A044SYE9-F1-model_v4 | 1 | 323 | 38 | 354 | 0.5795 |
0.6978 |
| AF-A0A0K0ETJ8-F1-model_v4 | 7 | 333 | 31 | 442 | 0.566 |
0.6947 |
| AF-G5EBG7-F1-model_v4 | 6 | 333 | 63 | 465 | 0.5556 |
0.6939 |
| AF-A0A3Q0KDL6-F1-model_v4 | 8 | 323 | 61 | 380 | 0.5528 |
0.6818 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-F4LID9-F1-model_v4 | GT0 | 6 | 343 | 2 | 318 | 0.7969 |
0.8817 |
| WFB91434.1 | GT0 | 13 | 337 | 1 | 303 | 0.7948 |
0.8786 |
| A0A9X1PGV1 | GT0 | 5 | 332 | 1 | 300 | 0.7922 |
0.8798 |
| AF-C6W5Q2-F1-model_v4 | GT0 | 11 | 335 | 1 | 297 | 0.7902 |
0.8815 |
| AF-A0A5B7ZML3-F1-model_v4 | GT0 | 8 | 335 | 1 | 304 | 0.7856 |
0.8729 |
| WFB35447.1 | GT0 | 8 | 331 | 1 | 301 | 0.7847 |
0.8696 |
| AF-C7LP40-F1-model_v4 | GT0 | 6 | 346 | 1 | 316 | 0.7819 |
0.8532 |
| AF-F0SBB0-F1-model_v4 | GT0 | 10 | 331 | 1 | 297 | 0.7804 |
0.8736 |
| AF-E4RZQ1-F1-model_v4 | GT0 | 12 | 335 | 1 | 297 | 0.7796 |
0.8709 |
| AF-D4LZG3-F1-model_v4 | GT0 | 12 | 341 | 1 | 330 | 0.7768 |
0.8444 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1B1U5H3 | GT13 | 8 | 327 | 1 | 296 | 0.7542 |
0.8576 |
| WBV42548.1 | GT13 | 9 | 334 | 8 | 310 | 0.6613 |
0.7449 |
| A0A6J5QBF3 | GT2 | 4 | 297 | 4 | 266 | 0.6132 |
0.7426 |
| C1EGW4 | GT13 | 15 | 323 | 1 | 312 | 0.5912 |
0.6781 |
| Q5BVR5 | GT13 | 8 | 309 | 86 | 342 | 0.5839 |
0.8022 |
| A0A517NDF8 | GT12 | 4 | 322 | 1 | 244 | 0.5807 |
0.7068 |
| A0A6M3IND0 | GT2 | 13 | 352 | 1 | 254 | 0.578 |
0.6995 |
| A0A1H0ZRL5 | GT2 | 12 | 334 | 1 | 250 | 0.5774 |
0.7145 |
| A0A385JNB5 | GT2 | 4 | 324 | 1 | 263 | 0.5764 |
0.7 |
| WCL48037.1 | GT2 | 4 | 351 | 2 | 301 | 0.5736 |
0.6593 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2apc-assembly1.cif.gz_A | 13 | 323 | 1 | 305 | 0.5999 |
0.699 |
| 1fo8-assembly1.cif.gz_A | 7 | 323 | 1 | 293 | 0.5816 |
0.6918 |
| 1h7l-assembly1.cif.gz_A | 13 | 353 | 1 | 238 | 0.5716 |
0.7032 |
| 5ggi-assembly1.cif.gz_A | 6 | 322 | 41 | 351 | 0.5702 |
0.6959 |
| 5ggi-assembly2.cif.gz_B | 6 | 323 | 198 | 508 | 0.4973 |
0.6954 |
| 5ggf-assembly1.cif.gz_A | 6 | 322 | 198 | 492 | 0.4761 |
0.6925 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q11068-F1-model_v4 | 1 | 325 | 79 | 446 | 0.5497 |
0.6814 |
| AF-Q09325-F1-model_v4 | 1 | 323 | 97 | 410 | 0.5493 |
0.7017 |
| AF-P27808-F1-model_v4 | 1 | 323 | 94 | 410 | 0.5453 |
0.69 |
| AF-P27115-F1-model_v4 | 3 | 323 | 97 | 410 | 0.5423 |
0.6928 |
| AF-P26572-F1-model_v4 | 8 | 323 | 99 | 408 | 0.5399 |
0.6965 |
| AF-A0R5Z2-F1-model_v4 | 8 | 330 | 1 | 272 | 0.5381 |
0.6591 |
| AF-Q9XGM8-F1-model_v4 | 9 | 323 | 100 | 406 | 0.5348 |
0.6957 |
| AF-Q91X88-F1-model_v4 | 6 | 326 | 294 | 649 | 0.468 |
0.6778 |
| AF-Q5EAB6-F1-model_v4 | 6 | 322 | 294 | 603 | 0.4666 |
0.6979 |
| AF-Q8WZA1-F1-model_v4 | 6 | 322 | 294 | 603 | 0.4666 |
0.698 |