Cluster: MGYG000004866_CGC33
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004866
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004866_57 | MGYG000004866_57_7 | 5767 | 6660 | + | 3.A.1.1.20 |
| TC | MGYG000004866_57 | MGYG000004866_57_8 | 6676 | 7533 | + | 3.A.1.1.18 |
| CAZyme | MGYG000004866_57 | MGYG000004866_57_9 | 7582 | 9495 | + | GH112 |
Gene ID: MGYG000004866_57_7
Type: TC
Location: 5767 - 6660 (+)
Type: TC
Location: 5767 - 6660 (+)
Gene ID: MGYG000004866_57_8
Type: TC
Location: 6676 - 7533 (+)
Type: TC
Location: 6676 - 7533 (+)
Gene ID: MGYG000004866_57_9
Type: CAZyme
Location: 7582 - 9495 (+)
Type: CAZyme
Location: 7582 - 9495 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004866_57_7 | vegan > omnivore | 1.56490 | 0.01878 |
| MGYG000004866_57_7 | vegetarian > omnivore | 2.06726 | 0.03759 |
| MGYG000004866_57_8 | vegan > omnivore | 1.66550 | 0.01878 |
| MGYG000004866_57_8 | vegetarian > omnivore | 2.23663 | 0.03759 |