Cluster: MGYG000004866_CGC32
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004866
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004866_54 | MGYG000004866_54_3 | 2116 | 4098 | - | GH42 |
| TC | MGYG000004866_54 | MGYG000004866_54_4 | 4265 | 5047 | - | 3.A.1.3.10 |
| TC | MGYG000004866_54 | MGYG000004866_54_5 | 5060 | 5719 | - | 3.A.1.3.14 |
| TC | MGYG000004866_54 | MGYG000004866_54_6 | 5719 | 6558 | - | 3.A.1.3.2 |
| sulfatase | MGYG000004866_54 | MGYG000004866_54_7 | 6703 | 7716 | - | S1_6 |
| TC | MGYG000004866_54 | MGYG000004866_54_8 | 7772 | 8518 | - | 3.A.1.3.25 |
| TC | MGYG000004866_54 | MGYG000004866_54_9 | 8505 | 9200 | - | 3.A.1.3.25 |
| TC | MGYG000004866_54 | MGYG000004866_54_10 | 9301 | 10137 | - | 3.A.1.3.25 |
| TC | MGYG000004866_54 | MGYG000004866_54_11 | 10592 | 11182 | - | 2.A.115.2.14 |
Gene ID: MGYG000004866_54_3
Type: CAZyme
Location: 2116 - 4098 (-)
Type: CAZyme
Location: 2116 - 4098 (-)
Gene ID: MGYG000004866_54_4
Type: TC
Location: 4265 - 5047 (-)
Type: TC
Location: 4265 - 5047 (-)
Gene ID: MGYG000004866_54_5
Type: TC
Location: 5060 - 5719 (-)
Type: TC
Location: 5060 - 5719 (-)
Gene ID: MGYG000004866_54_6
Type: TC
Location: 5719 - 6558 (-)
Type: TC
Location: 5719 - 6558 (-)
Gene ID: MGYG000004866_54_7
Type: sulfatase
Location: 6703 - 7716 (-)
Type: sulfatase
Location: 6703 - 7716 (-)
Gene ID: MGYG000004866_54_8
Type: TC
Location: 7772 - 8518 (-)
Type: TC
Location: 7772 - 8518 (-)
Gene ID: MGYG000004866_54_9
Type: TC
Location: 8505 - 9200 (-)
Type: TC
Location: 8505 - 9200 (-)
Gene ID: MGYG000004866_54_10
Type: TC
Location: 9301 - 10137 (-)
Type: TC
Location: 9301 - 10137 (-)
Gene ID: MGYG000004866_54_11
Type: TC
Location: 10592 - 11182 (-)
Type: TC
Location: 10592 - 11182 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.