Cluster: MGYG000004866_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004866
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004866_21 | MGYG000004866_21_16 | 16395 | 17363 | + | 3.A.1.132.4 |
| TC | MGYG000004866_21 | MGYG000004866_21_17 | 17364 | 18227 | + | 3.A.1.132.1 |
| pfam | MGYG000004866_21 | MGYG000004866_21_18 | 18241 | 19662 | + | ABC_transp_aux |
| pfam | MGYG000004866_21 | MGYG000004866_21_19 | 19673 | 20668 | + | DUF4340 | DUF4340 |
| CAZyme | MGYG000004866_21 | MGYG000004866_21_20 | 20977 | 22200 | + | GH3 |
| CAZyme | MGYG000004866_21 | MGYG000004866_21_21 | 22212 | 23273 | + | GT4 |
Gene ID: MGYG000004866_21_16
Type: TC
Location: 16395 - 17363 (+)
Type: TC
Location: 16395 - 17363 (+)
Gene ID: MGYG000004866_21_17
Type: TC
Location: 17364 - 18227 (+)
Type: TC
Location: 17364 - 18227 (+)
Gene ID: MGYG000004866_21_18
Type: pfam
Location: 18241 - 19662 (+)
Type: pfam
Location: 18241 - 19662 (+)
Gene ID: MGYG000004866_21_19
Type: pfam
Location: 19673 - 20668 (+)
Type: pfam
Location: 19673 - 20668 (+)
Gene ID: MGYG000004866_21_20
Type: CAZyme
Location: 20977 - 22200 (+)
Type: CAZyme
Location: 20977 - 22200 (+)
Gene ID: MGYG000004866_21_21
Type: CAZyme
Location: 22212 - 23273 (+)
Type: CAZyme
Location: 22212 - 23273 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.