Cluster: MGYG000004866_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004866
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004866_14 | MGYG000004866_14_30 | 30819 | 31871 | + | 9.B.18.2.1 |
| pfam | MGYG000004866_14 | MGYG000004866_14_31 | 31868 | 33067 | + | Epimerase | Polysacc_synt_C |
| pfam | MGYG000004866_14 | MGYG000004866_14_32 | 33082 | 34221 | + | Epimerase_2 |
| CAZyme | MGYG000004866_14 | MGYG000004866_14_33 | 34240 | 35457 | + | GT4 |
| CAZyme | MGYG000004866_14 | MGYG000004866_14_34 | 35479 | 36198 | + | GT2 |
| pfam | MGYG000004866_14 | MGYG000004866_14_35 | 36195 | 36551 | + | DUF2304 |
| TC | MGYG000004866_14 | MGYG000004866_14_36 | 36584 | 38083 | + | 2.A.50.2.1 |
Gene ID: MGYG000004866_14_30
Type: TC
Location: 30819 - 31871 (+)
Type: TC
Location: 30819 - 31871 (+)
Gene ID: MGYG000004866_14_31
Type: pfam
Location: 31868 - 33067 (+)
Type: pfam
Location: 31868 - 33067 (+)
Gene ID: MGYG000004866_14_32
Type: pfam
Location: 33082 - 34221 (+)
Type: pfam
Location: 33082 - 34221 (+)
Gene ID: MGYG000004866_14_33
Type: CAZyme
Location: 34240 - 35457 (+)
Type: CAZyme
Location: 34240 - 35457 (+)
Gene ID: MGYG000004866_14_34
Type: CAZyme
Location: 35479 - 36198 (+)
Type: CAZyme
Location: 35479 - 36198 (+)
Gene ID: MGYG000004866_14_35
Type: pfam
Location: 36195 - 36551 (+)
Type: pfam
Location: 36195 - 36551 (+)
Gene ID: MGYG000004866_14_36
Type: TC
Location: 36584 - 38083 (+)
Type: TC
Location: 36584 - 38083 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.