Cluster: MGYG000004589_CGC4
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004589
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004589_3 | MGYG000004589_3_9 | 7254 | 8681 | - | 2.A.66.1.26 |
| NULL(UNKNOWN) | MGYG000004589_3 | MGYG000004589_3_10 | 8804 | 8956 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004589_3 | MGYG000004589_3_11 | 9119 | 10123 | + | 2.A.119.1.3 |
| TF | MGYG000004589_3 | MGYG000004589_3_12 | 10206 | 10607 | + | HTH_5 |
| TC | MGYG000004589_3 | MGYG000004589_3_13 | 10652 | 11716 | + | 2.A.59.1.6 |
| pfam | MGYG000004589_3 | MGYG000004589_3_14 | 11745 | 11972 | + | Thioredoxin_3 |
| pfam | MGYG000004589_3 | MGYG000004589_3_15 | 11969 | 12415 | + | LMWPc |
| CAZyme | MGYG000004589_3 | MGYG000004589_3_16 | 12804 | 14099 | + | GH27 |
| NULL(UNKNOWN) | MGYG000004589_3 | MGYG000004589_3_17 | 14151 | 14255 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004589_3 | MGYG000004589_3_18 | 14266 | 15447 | - | AAA_14 | DUF4143 |
| TC | MGYG000004589_3 | MGYG000004589_3_19 | 15902 | 17095 | - | 2.A.39.1.3 |
| STP | MGYG000004589_3 | MGYG000004589_3_20 | 17076 | 17927 | - | PfkB |
| TC | MGYG000004589_3 | MGYG000004589_3_21 | 17944 | 18456 | - | 3.A.1.26.5 |
Gene ID: MGYG000004589_3_9
Type: TC
Location: 7254 - 8681 (-)
Type: TC
Location: 7254 - 8681 (-)
Gene ID: MGYG000004589_3_10
Type:
Location: 8804 - 8956 (-)
Type:
Location: 8804 - 8956 (-)
Gene ID: MGYG000004589_3_11
Type: TC
Location: 9119 - 10123 (+)
Type: TC
Location: 9119 - 10123 (+)
Gene ID: MGYG000004589_3_12
Type: TF
Location: 10206 - 10607 (+)
Type: TF
Location: 10206 - 10607 (+)
Gene ID: MGYG000004589_3_13
Type: TC
Location: 10652 - 11716 (+)
Type: TC
Location: 10652 - 11716 (+)
Gene ID: MGYG000004589_3_14
Type: pfam
Location: 11745 - 11972 (+)
Type: pfam
Location: 11745 - 11972 (+)
Gene ID: MGYG000004589_3_15
Type: pfam
Location: 11969 - 12415 (+)
Type: pfam
Location: 11969 - 12415 (+)
Gene ID: MGYG000004589_3_16
Type: CAZyme
Location: 12804 - 14099 (+)
Type: CAZyme
Location: 12804 - 14099 (+)
Gene ID: MGYG000004589_3_17
Type:
Location: 14151 - 14255 (-)
Type:
Location: 14151 - 14255 (-)
Gene ID: MGYG000004589_3_18
Type: pfam
Location: 14266 - 15447 (-)
Type: pfam
Location: 14266 - 15447 (-)
Gene ID: MGYG000004589_3_19
Type: TC
Location: 15902 - 17095 (-)
Type: TC
Location: 15902 - 17095 (-)
Gene ID: MGYG000004589_3_20
Type: STP
Location: 17076 - 17927 (-)
Type: STP
Location: 17076 - 17927 (-)
Gene ID: MGYG000004589_3_21
Type: TC
Location: 17944 - 18456 (-)
Type: TC
Location: 17944 - 18456 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.