Cluster: MGYG000004275_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004275
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004275_25 | MGYG000004275_25_9 | 6089 | 7387 | - | GH32 |
| TC | MGYG000004275_25 | MGYG000004275_25_10 | 7401 | 8495 | - | 3.A.1.1.27 |
| TC | MGYG000004275_25 | MGYG000004275_25_11 | 8499 | 9350 | - | 3.A.1.1.20 |
| TC | MGYG000004275_25 | MGYG000004275_25_12 | 9322 | 10221 | - | 3.A.1.1.20 |
Gene ID: MGYG000004275_25_9
Type: CAZyme
Location: 6089 - 7387 (-)
Type: CAZyme
Location: 6089 - 7387 (-)
Gene ID: MGYG000004275_25_10
Type: TC
Location: 7401 - 8495 (-)
Type: TC
Location: 7401 - 8495 (-)
Gene ID: MGYG000004275_25_11
Type: TC
Location: 8499 - 9350 (-)
Type: TC
Location: 8499 - 9350 (-)
Gene ID: MGYG000004275_25_12
Type: TC
Location: 9322 - 10221 (-)
Type: TC
Location: 9322 - 10221 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004275_25_9 | vegan > omnivore | 1.37244 | 0.00364 |
| MGYG000004275_25_10 | vegan > omnivore | 1.78038 | 0.00364 |
| MGYG000004275_25_10 | vegetarian > omnivore | 1.45770 | 0.03029 |
| MGYG000004275_25_11 | vegan > omnivore | 1.75107 | 0.00364 |
| MGYG000004275_25_12 | vegan > omnivore | 2.07399 | 0.00364 |