Cluster: MGYG000004275_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004275
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004275_19 | MGYG000004275_19_8 | 7185 | 8597 | + | 9.B.18.1.3 |
| pfam | MGYG000004275_19 | MGYG000004275_19_9 | 8594 | 9670 | + | NTP_transferase | NTP_transf_3 | ManC_GMP_beta-helix |
| pfam | MGYG000004275_19 | MGYG000004275_19_10 | 9740 | 10774 | + | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | MGYG000004275_19 | MGYG000004275_19_11 | 10892 | 12043 | + | GT4 |
| CAZyme | MGYG000004275_19 | MGYG000004275_19_12 | 12036 | 13193 | + | GT4 |
Gene ID: MGYG000004275_19_8
Type: TC
Location: 7185 - 8597 (+)
Type: TC
Location: 7185 - 8597 (+)
Gene ID: MGYG000004275_19_9
Type: pfam
Location: 8594 - 9670 (+)
Type: pfam
Location: 8594 - 9670 (+)
Gene ID: MGYG000004275_19_10
Type: pfam
Location: 9740 - 10774 (+)
Type: pfam
Location: 9740 - 10774 (+)
Gene ID: MGYG000004275_19_11
Type: CAZyme
Location: 10892 - 12043 (+)
Type: CAZyme
Location: 10892 - 12043 (+)
Gene ID: MGYG000004275_19_12
Type: CAZyme
Location: 12036 - 13193 (+)
Type: CAZyme
Location: 12036 - 13193 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.