Cluster: MGYG000003419_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003419
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003419_220 | MGYG000003419_220_10 | 13874 | 16465 | + | CBM26 | GH13_6 |
| CAZyme | MGYG000003419_220 | MGYG000003419_220_11 | 16775 | 19468 | + | GH13_10 |
| pfam | MGYG000003419_220 | MGYG000003419_220_12 | 19682 | 19909 | + | DUF2795 |
| pfam | MGYG000003419_220 | MGYG000003419_220_13 | 19984 | 20901 | + | PorP_SprF |
| TC | MGYG000003419_220 | MGYG000003419_220_14 | 20946 | 22286 | + | 9.A.25.1.1 |
| pfam | MGYG000003419_220 | MGYG000003419_220_15 | 22317 | 23333 | + | GldL_N |
| TC | MGYG000003419_220 | MGYG000003419_220_16 | 23345 | 24910 | + | 9.A.25.1.1 |
Gene ID: MGYG000003419_220_10
Type: CAZyme
Location: 13874 - 16465 (+)
Type: CAZyme
Location: 13874 - 16465 (+)
Gene ID: MGYG000003419_220_11
Type: CAZyme
Location: 16775 - 19468 (+)
Type: CAZyme
Location: 16775 - 19468 (+)
Gene ID: MGYG000003419_220_12
Type: pfam
Location: 19682 - 19909 (+)
Type: pfam
Location: 19682 - 19909 (+)
Gene ID: MGYG000003419_220_13
Type: pfam
Location: 19984 - 20901 (+)
Type: pfam
Location: 19984 - 20901 (+)
Gene ID: MGYG000003419_220_14
Type: TC
Location: 20946 - 22286 (+)
Type: TC
Location: 20946 - 22286 (+)
Gene ID: MGYG000003419_220_15
Type: pfam
Location: 22317 - 23333 (+)
Type: pfam
Location: 22317 - 23333 (+)
Gene ID: MGYG000003419_220_16
Type: TC
Location: 23345 - 24910 (+)
Type: TC
Location: 23345 - 24910 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Species
RF16 sp900766775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.