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Cluster: MGYG000003419_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003419_115 MGYG000003419_115_8 10630 11964 + 3.A.3.1.8
TC MGYG000003419_115 MGYG000003419_115_9 12126 13634 + 2.A.38.1.3
pfam MGYG000003419_115 MGYG000003419_115_10 13851 15269 + Lipase_GDSL_2
TC MGYG000003419_115 MGYG000003419_115_11 15295 17247 + 2.A.50.2.1
pfam MGYG000003419_115 MGYG000003419_115_12 17277 17918 + CoaE | AAA_18
TC MGYG000003419_115 MGYG000003419_115_13 18233 21613 + 1.B.14.6.1
TC MGYG000003419_115 MGYG000003419_115_14 21646 23601 + 8.A.46.1.3
CAZyme MGYG000003419_115 MGYG000003419_115_15 23613 25055 + PL1_2
CAZyme MGYG000003419_115 MGYG000003419_115_16 25063 26556 + GH28
Gene ID: MGYG000003419_115_8
Type: TC
Location: 10630 - 11964 (+)
Gene ID: MGYG000003419_115_9
Type: TC
Location: 12126 - 13634 (+)
Gene ID: MGYG000003419_115_10
Type: pfam
Location: 13851 - 15269 (+)
Gene ID: MGYG000003419_115_11
Type: TC
Location: 15295 - 17247 (+)
Gene ID: MGYG000003419_115_12
Type: pfam
Location: 17277 - 17918 (+)
Gene ID: MGYG000003419_115_13
Type: TC
Location: 18233 - 21613 (+)
Gene ID: MGYG000003419_115_14
Type: TC
Location: 21646 - 23601 (+)
Gene ID: MGYG000003419_115_15
Type: CAZyme
Location: 23613 - 25055 (+)
Gene ID: MGYG000003419_115_16
Type: CAZyme
Location: 25063 - 26556 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Paludibacteraceae
→
Genus
RF16
→
Species
RF16 sp900766775

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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