Cluster: MGYG000003383_CGC52
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003383
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003383_29 | MGYG000003383_29_159 | 193712 | 195349 | - | GH36 |
| TC | MGYG000003383_29 | MGYG000003383_29_160 | 195490 | 196323 | + | 3.A.1.5.37 |
| STP | MGYG000003383_29 | MGYG000003383_29_161 | 196465 | 197673 | - | Aminotran_1_2 |
| pfam | MGYG000003383_29 | MGYG000003383_29_162 | 197706 | 199328 | - | TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N |
| TC | MGYG000003383_29 | MGYG000003383_29_163 | 199485 | 201140 | - | 3.A.1.5.35 |
| pfam | MGYG000003383_29 | MGYG000003383_29_164 | 201608 | 202663 | + | ADH_zinc_N | ADH_N |
| CAZyme | MGYG000003383_29 | MGYG000003383_29_165 | 202966 | 205656 | - | GH2 |
| TC | MGYG000003383_29 | MGYG000003383_29_166 | 205753 | 206751 | - | 3.A.1.5.14 |
| TC | MGYG000003383_29 | MGYG000003383_29_167 | 206757 | 207740 | - | 3.A.1.5.6 |
| TC | MGYG000003383_29 | MGYG000003383_29_168 | 207737 | 208594 | - | 3.A.1.5.8 |
| TC | MGYG000003383_29 | MGYG000003383_29_169 | 208591 | 209469 | - | 3.A.1.5.2 |
| TC | MGYG000003383_29 | MGYG000003383_29_170 | 209575 | 211041 | - | 3.A.1.5.28 |
Gene ID: MGYG000003383_29_159
Type: CAZyme
Location: 193712 - 195349 (-)
Type: CAZyme
Location: 193712 - 195349 (-)
Gene ID: MGYG000003383_29_160
Type: TC
Location: 195490 - 196323 (+)
Type: TC
Location: 195490 - 196323 (+)
Gene ID: MGYG000003383_29_161
Type: STP
Location: 196465 - 197673 (-)
Type: STP
Location: 196465 - 197673 (-)
Gene ID: MGYG000003383_29_162
Type: pfam
Location: 197706 - 199328 (-)
Type: pfam
Location: 197706 - 199328 (-)
Gene ID: MGYG000003383_29_163
Type: TC
Location: 199485 - 201140 (-)
Type: TC
Location: 199485 - 201140 (-)
Gene ID: MGYG000003383_29_164
Type: pfam
Location: 201608 - 202663 (+)
Type: pfam
Location: 201608 - 202663 (+)
Gene ID: MGYG000003383_29_165
Type: CAZyme
Location: 202966 - 205656 (-)
Type: CAZyme
Location: 202966 - 205656 (-)
Gene ID: MGYG000003383_29_166
Type: TC
Location: 205753 - 206751 (-)
Type: TC
Location: 205753 - 206751 (-)
Gene ID: MGYG000003383_29_167
Type: TC
Location: 206757 - 207740 (-)
Type: TC
Location: 206757 - 207740 (-)
Gene ID: MGYG000003383_29_168
Type: TC
Location: 207737 - 208594 (-)
Type: TC
Location: 207737 - 208594 (-)
Gene ID: MGYG000003383_29_169
Type: TC
Location: 208591 - 209469 (-)
Type: TC
Location: 208591 - 209469 (-)
Gene ID: MGYG000003383_29_170
Type: TC
Location: 209575 - 211041 (-)
Type: TC
Location: 209575 - 211041 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium scardovii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.