Cluster: MGYG000003383_CGC44
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003383
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003383_27 | MGYG000003383_27_15 | 14017 | 15132 | + | 3.A.1.24.3 |
| TC | MGYG000003383_27 | MGYG000003383_27_16 | 15129 | 15809 | + | 3.A.1.24.6 |
| TC | MGYG000003383_27 | MGYG000003383_27_17 | 15897 | 16766 | + | 3.A.1.24.5 |
| pfam | MGYG000003383_27 | MGYG000003383_27_18 | 17118 | 18194 | - | Fe-ADH | Fe-ADH_2 |
| STP | MGYG000003383_27 | MGYG000003383_27_19 | 18340 | 19656 | - | Aminotran_1_2 |
| TC | MGYG000003383_27 | MGYG000003383_27_20 | 19861 | 20229 | - | 9.B.55.2.2 |
| pfam | MGYG000003383_27 | MGYG000003383_27_21 | 20606 | 21061 | + | HSP20 |
| peptidase | MGYG000003383_27 | MGYG000003383_27_22 | 21276 | 22352 | - | S33.UPW |
| TC | MGYG000003383_27 | MGYG000003383_27_23 | 22464 | 24788 | - | 9.B.74.1.1 |
| TC | MGYG000003383_27 | MGYG000003383_27_24 | 24785 | 27517 | - | 9.B.74.1.1 |
| CAZyme | MGYG000003383_27 | MGYG000003383_27_25 | 27829 | 28725 | - | GH43_24 |
| TC | MGYG000003383_27 | MGYG000003383_27_26 | 28972 | 29949 | - | 3.A.1.1.48 |
| TC | MGYG000003383_27 | MGYG000003383_27_27 | 29949 | 30890 | - | 3.A.1.1.48 |
Gene ID: MGYG000003383_27_15
Type: TC
Location: 14017 - 15132 (+)
Type: TC
Location: 14017 - 15132 (+)
Gene ID: MGYG000003383_27_16
Type: TC
Location: 15129 - 15809 (+)
Type: TC
Location: 15129 - 15809 (+)
Gene ID: MGYG000003383_27_17
Type: TC
Location: 15897 - 16766 (+)
Type: TC
Location: 15897 - 16766 (+)
Gene ID: MGYG000003383_27_18
Type: pfam
Location: 17118 - 18194 (-)
Type: pfam
Location: 17118 - 18194 (-)
Gene ID: MGYG000003383_27_19
Type: STP
Location: 18340 - 19656 (-)
Type: STP
Location: 18340 - 19656 (-)
Gene ID: MGYG000003383_27_20
Type: TC
Location: 19861 - 20229 (-)
Type: TC
Location: 19861 - 20229 (-)
Gene ID: MGYG000003383_27_21
Type: pfam
Location: 20606 - 21061 (+)
Type: pfam
Location: 20606 - 21061 (+)
Gene ID: MGYG000003383_27_22
Type: peptidase
Location: 21276 - 22352 (-)
Type: peptidase
Location: 21276 - 22352 (-)
Gene ID: MGYG000003383_27_23
Type: TC
Location: 22464 - 24788 (-)
Type: TC
Location: 22464 - 24788 (-)
Gene ID: MGYG000003383_27_24
Type: TC
Location: 24785 - 27517 (-)
Type: TC
Location: 24785 - 27517 (-)
Gene ID: MGYG000003383_27_25
Type: CAZyme
Location: 27829 - 28725 (-)
Type: CAZyme
Location: 27829 - 28725 (-)
Gene ID: MGYG000003383_27_26
Type: TC
Location: 28972 - 29949 (-)
Type: TC
Location: 28972 - 29949 (-)
Gene ID: MGYG000003383_27_27
Type: TC
Location: 29949 - 30890 (-)
Type: TC
Location: 29949 - 30890 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium scardovii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.