Cluster: MGYG000003383_CGC43
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003383
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003383_26 | MGYG000003383_26_55 | 68112 | 68906 | + | 3.A.1.122.16 |
| pfam | MGYG000003383_26 | MGYG000003383_26_56 | 68903 | 70357 | + | FtsX |
| STP | MGYG000003383_26 | MGYG000003383_26_57 | 70972 | 72477 | - | SBP_bac_5 |
| TC | MGYG000003383_26 | MGYG000003383_26_58 | 72532 | 73443 | - | 3.A.1.5.12 |
| TC | MGYG000003383_26 | MGYG000003383_26_59 | 73431 | 74510 | - | 3.A.1.5.26 |
| TC | MGYG000003383_26 | MGYG000003383_26_60 | 74528 | 75526 | - | 3.A.1.5.26 |
| TC | MGYG000003383_26 | MGYG000003383_26_61 | 75552 | 76223 | - | 3.A.1.5.23 |
| TC | MGYG000003383_26 | MGYG000003383_26_62 | 76480 | 77421 | - | 2.A.69.3.1 |
| peptidase | MGYG000003383_26 | MGYG000003383_26_63 | 77608 | 78888 | + | M20.UPW |
| TF | MGYG000003383_26 | MGYG000003383_26_64 | 78994 | 79932 | - | HTH_AraC |
| TC | MGYG000003383_26 | MGYG000003383_26_65 | 80153 | 81418 | + | 2.A.23.1.3 |
| CAZyme | MGYG000003383_26 | MGYG000003383_26_66 | 81486 | 83792 | + | GH146 |
Gene ID: MGYG000003383_26_55
Type: TC
Location: 68112 - 68906 (+)
Type: TC
Location: 68112 - 68906 (+)
Gene ID: MGYG000003383_26_56
Type: pfam
Location: 68903 - 70357 (+)
Type: pfam
Location: 68903 - 70357 (+)
Gene ID: MGYG000003383_26_57
Type: STP
Location: 70972 - 72477 (-)
Type: STP
Location: 70972 - 72477 (-)
Gene ID: MGYG000003383_26_58
Type: TC
Location: 72532 - 73443 (-)
Type: TC
Location: 72532 - 73443 (-)
Gene ID: MGYG000003383_26_59
Type: TC
Location: 73431 - 74510 (-)
Type: TC
Location: 73431 - 74510 (-)
Gene ID: MGYG000003383_26_60
Type: TC
Location: 74528 - 75526 (-)
Type: TC
Location: 74528 - 75526 (-)
Gene ID: MGYG000003383_26_61
Type: TC
Location: 75552 - 76223 (-)
Type: TC
Location: 75552 - 76223 (-)
Gene ID: MGYG000003383_26_62
Type: TC
Location: 76480 - 77421 (-)
Type: TC
Location: 76480 - 77421 (-)
Gene ID: MGYG000003383_26_63
Type: peptidase
Location: 77608 - 78888 (+)
Type: peptidase
Location: 77608 - 78888 (+)
Gene ID: MGYG000003383_26_64
Type: TF
Location: 78994 - 79932 (-)
Type: TF
Location: 78994 - 79932 (-)
Gene ID: MGYG000003383_26_65
Type: TC
Location: 80153 - 81418 (+)
Type: TC
Location: 80153 - 81418 (+)
Gene ID: MGYG000003383_26_66
Type: CAZyme
Location: 81486 - 83792 (+)
Type: CAZyme
Location: 81486 - 83792 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium scardovii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.