Cluster: MGYG000003383_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003383
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003383_17 | MGYG000003383_17_63 | 77199 | 78116 | - | 3.A.1.1.11 |
| TC | MGYG000003383_17 | MGYG000003383_17_64 | 78106 | 79068 | - | 3.A.1.1.11 |
| STP | MGYG000003383_17 | MGYG000003383_17_65 | 79280 | 80326 | - | Glycos_trans_3N |
| TC | MGYG000003383_17 | MGYG000003383_17_66 | 80597 | 82162 | - | 2.A.2.5.1 |
| CAZyme | MGYG000003383_17 | MGYG000003383_17_67 | 82394 | 84409 | - | GH115 |
| TF | MGYG000003383_17 | MGYG000003383_17_68 | 84771 | 87017 | + | LacI |
| TC | MGYG000003383_17 | MGYG000003383_17_69 | 87549 | 90413 | - | 3.A.5.2.2 |
Gene ID: MGYG000003383_17_63
Type: TC
Location: 77199 - 78116 (-)
Type: TC
Location: 77199 - 78116 (-)
Gene ID: MGYG000003383_17_64
Type: TC
Location: 78106 - 79068 (-)
Type: TC
Location: 78106 - 79068 (-)
Gene ID: MGYG000003383_17_65
Type: STP
Location: 79280 - 80326 (-)
Type: STP
Location: 79280 - 80326 (-)
Gene ID: MGYG000003383_17_66
Type: TC
Location: 80597 - 82162 (-)
Type: TC
Location: 80597 - 82162 (-)
Gene ID: MGYG000003383_17_67
Type: CAZyme
Location: 82394 - 84409 (-)
Type: CAZyme
Location: 82394 - 84409 (-)
Gene ID: MGYG000003383_17_68
Type: TF
Location: 84771 - 87017 (+)
Type: TF
Location: 84771 - 87017 (+)
Gene ID: MGYG000003383_17_69
Type: TC
Location: 87549 - 90413 (-)
Type: TC
Location: 87549 - 90413 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium scardovii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.