Cluster: MGYG000003355_CGC59
🧬 Cluster Details
- Gene Count: 28
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000003355
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003355_180 | MGYG000003355_180_8 | 7050 | 7904 | + | 3.A.1.1.11 |
| TC | MGYG000003355_180 | MGYG000003355_180_9 | 7927 | 8799 | + | 3.A.1.1.11 |
| NULL(UNKNOWN) | MGYG000003355_180 | MGYG000003355_180_10 | 8939 | 9517 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003355_180 | MGYG000003355_180_11 | 9742 | 11688 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003355_180 | MGYG000003355_180_12 | 11700 | 12614 | + | GT108 |
| CAZyme | MGYG000003355_180 | MGYG000003355_180_13 | 12770 | 14263 | + | GH13_23 |
| TF | MGYG000003355_180 | MGYG000003355_180_14 | 14293 | 15279 | + | LacI |
| CAZyme | MGYG000003355_180 | MGYG000003355_180_15 | 15296 | 16381 | + | GH130_4 |
| TC | MGYG000003355_180 | MGYG000003355_180_16 | 16717 | 17904 | + | 2.A.36.2.1 |
| pfam | MGYG000003355_180 | MGYG000003355_180_17 | 18131 | 18559 | + | DUF386 |
| pfam | MGYG000003355_180 | MGYG000003355_180_18 | 18980 | 20512 | + | Apiosidase | DUF5060 | DUF5605 |
| TC | MGYG000003355_180 | MGYG000003355_180_19 | 20527 | 21468 | + | 3.A.1.1.10 |
| TC | MGYG000003355_180 | MGYG000003355_180_20 | 21481 | 22368 | + | 3.A.1.1.10 |
| STP | MGYG000003355_180 | MGYG000003355_180_21 | 22391 | 24049 | + | SBP_bac_1 |
| TF | MGYG000003355_180 | MGYG000003355_180_22 | 24143 | 26479 | + | HTH_AraC |
| CAZyme | MGYG000003355_180 | MGYG000003355_180_23 | 26466 | 27491 | + | GH33 |
| CAZyme | MGYG000003355_180 | MGYG000003355_180_24 | 27535 | 30675 | + | GH106 |
| pfam | MGYG000003355_180 | MGYG000003355_180_25 | 30723 | 31643 | + | DHDPS |
| pfam | MGYG000003355_180 | MGYG000003355_180_26 | 31857 | 32717 | + | MTHFR |
| CAZyme | MGYG000003355_180 | MGYG000003355_180_27 | 32864 | 34750 | + | GH25 |
| STP | MGYG000003355_180 | MGYG000003355_180_28 | 35428 | 37266 | + | SBP_bac_5 |
| TC | MGYG000003355_180 | MGYG000003355_180_29 | 37326 | 38264 | + | 3.A.1.5.19 |
| TC | MGYG000003355_180 | MGYG000003355_180_30 | 38265 | 39239 | + | 3.A.1.5.2 |
| TC | MGYG000003355_180 | MGYG000003355_180_31 | 39248 | 40285 | + | 3.A.1.5.19 |
| TC | MGYG000003355_180 | MGYG000003355_180_32 | 40287 | 41255 | + | 3.A.1.5.25 |
| pfam | MGYG000003355_180 | MGYG000003355_180_33 | 41359 | 41883 | + | DUF6465 |
| CAZyme | MGYG000003355_180 | MGYG000003355_180_34 | 42041 | 43009 | + | GT2 |
| CAZyme | MGYG000003355_180 | MGYG000003355_180_35 | 43011 | 43949 | + | GT2 |
Gene ID: MGYG000003355_180_8
Type: TC
Location: 7050 - 7904 (+)
Type: TC
Location: 7050 - 7904 (+)
Gene ID: MGYG000003355_180_9
Type: TC
Location: 7927 - 8799 (+)
Type: TC
Location: 7927 - 8799 (+)
Gene ID: MGYG000003355_180_10
Type:
Location: 8939 - 9517 (+)
Type:
Location: 8939 - 9517 (+)
Gene ID: MGYG000003355_180_11
Type:
Location: 9742 - 11688 (+)
Type:
Location: 9742 - 11688 (+)
Gene ID: MGYG000003355_180_12
Type: CAZyme
Location: 11700 - 12614 (+)
Type: CAZyme
Location: 11700 - 12614 (+)
Gene ID: MGYG000003355_180_13
Type: CAZyme
Location: 12770 - 14263 (+)
Type: CAZyme
Location: 12770 - 14263 (+)
Gene ID: MGYG000003355_180_14
Type: TF
Location: 14293 - 15279 (+)
Type: TF
Location: 14293 - 15279 (+)
Gene ID: MGYG000003355_180_15
Type: CAZyme
Location: 15296 - 16381 (+)
Type: CAZyme
Location: 15296 - 16381 (+)
Gene ID: MGYG000003355_180_16
Type: TC
Location: 16717 - 17904 (+)
Type: TC
Location: 16717 - 17904 (+)
Gene ID: MGYG000003355_180_17
Type: pfam
Location: 18131 - 18559 (+)
Type: pfam
Location: 18131 - 18559 (+)
Gene ID: MGYG000003355_180_18
Type: pfam
Location: 18980 - 20512 (+)
Type: pfam
Location: 18980 - 20512 (+)
Gene ID: MGYG000003355_180_19
Type: TC
Location: 20527 - 21468 (+)
Type: TC
Location: 20527 - 21468 (+)
Gene ID: MGYG000003355_180_20
Type: TC
Location: 21481 - 22368 (+)
Type: TC
Location: 21481 - 22368 (+)
Gene ID: MGYG000003355_180_21
Type: STP
Location: 22391 - 24049 (+)
Type: STP
Location: 22391 - 24049 (+)
Gene ID: MGYG000003355_180_22
Type: TF
Location: 24143 - 26479 (+)
Type: TF
Location: 24143 - 26479 (+)
Gene ID: MGYG000003355_180_23
Type: CAZyme
Location: 26466 - 27491 (+)
Type: CAZyme
Location: 26466 - 27491 (+)
Gene ID: MGYG000003355_180_24
Type: CAZyme
Location: 27535 - 30675 (+)
Type: CAZyme
Location: 27535 - 30675 (+)
Gene ID: MGYG000003355_180_25
Type: pfam
Location: 30723 - 31643 (+)
Type: pfam
Location: 30723 - 31643 (+)
Gene ID: MGYG000003355_180_26
Type: pfam
Location: 31857 - 32717 (+)
Type: pfam
Location: 31857 - 32717 (+)
Gene ID: MGYG000003355_180_27
Type: CAZyme
Location: 32864 - 34750 (+)
Type: CAZyme
Location: 32864 - 34750 (+)
Gene ID: MGYG000003355_180_28
Type: STP
Location: 35428 - 37266 (+)
Type: STP
Location: 35428 - 37266 (+)
Gene ID: MGYG000003355_180_29
Type: TC
Location: 37326 - 38264 (+)
Type: TC
Location: 37326 - 38264 (+)
Gene ID: MGYG000003355_180_30
Type: TC
Location: 38265 - 39239 (+)
Type: TC
Location: 38265 - 39239 (+)
Gene ID: MGYG000003355_180_31
Type: TC
Location: 39248 - 40285 (+)
Type: TC
Location: 39248 - 40285 (+)
Gene ID: MGYG000003355_180_32
Type: TC
Location: 40287 - 41255 (+)
Type: TC
Location: 40287 - 41255 (+)
Gene ID: MGYG000003355_180_33
Type: pfam
Location: 41359 - 41883 (+)
Type: pfam
Location: 41359 - 41883 (+)
Gene ID: MGYG000003355_180_34
Type: CAZyme
Location: 42041 - 43009 (+)
Type: CAZyme
Location: 42041 - 43009 (+)
Gene ID: MGYG000003355_180_35
Type: CAZyme
Location: 43011 - 43949 (+)
Type: CAZyme
Location: 43011 - 43949 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.