Cluster: MGYG000003355_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003355
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003355_47 | MGYG000003355_47_9 | 12979 | 13881 | - | 1.A.23.2.2 |
| CAZyme | MGYG000003355_47 | MGYG000003355_47_10 | 13899 | 16139 | - | CBM48 | GH13_9 |
| TC | MGYG000003355_47 | MGYG000003355_47_11 | 16320 | 16979 | - | 9.B.28.1.8 |
| pfam | MGYG000003355_47 | MGYG000003355_47_12 | 17042 | 17974 | - | PMI_typeI_cat | MPI_cupin_dom |
| pfam | MGYG000003355_47 | MGYG000003355_47_13 | 18257 | 18880 | + | UPF0020 | MTS | PrmA | Methyltransf_11 | Methyltransf_16 | Methyltransf_18 | Methyltransf_25 | Methyltransf_31 |
| TC | MGYG000003355_47 | MGYG000003355_47_14 | 18914 | 20683 | - | 3.A.1.135.5 |
| TC | MGYG000003355_47 | MGYG000003355_47_15 | 20728 | 22449 | - | 3.A.1.135.5 |
Gene ID: MGYG000003355_47_9
Type: TC
Location: 12979 - 13881 (-)
Type: TC
Location: 12979 - 13881 (-)
Gene ID: MGYG000003355_47_10
Type: CAZyme
Location: 13899 - 16139 (-)
Type: CAZyme
Location: 13899 - 16139 (-)
Gene ID: MGYG000003355_47_11
Type: TC
Location: 16320 - 16979 (-)
Type: TC
Location: 16320 - 16979 (-)
Gene ID: MGYG000003355_47_12
Type: pfam
Location: 17042 - 17974 (-)
Type: pfam
Location: 17042 - 17974 (-)
Gene ID: MGYG000003355_47_13
Type: pfam
Location: 18257 - 18880 (+)
Type: pfam
Location: 18257 - 18880 (+)
Gene ID: MGYG000003355_47_14
Type: TC
Location: 18914 - 20683 (-)
Type: TC
Location: 18914 - 20683 (-)
Gene ID: MGYG000003355_47_15
Type: TC
Location: 20728 - 22449 (-)
Type: TC
Location: 20728 - 22449 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.