Cluster: MGYG000003161_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003161
- CGC Family ID: CGCFAM_00515
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003161_12 | MGYG000003161_12_25 | 24599 | 26479 | + | CBM48 | GH13_9 |
| pfam | MGYG000003161_12 | MGYG000003161_12_26 | 26499 | 27707 | + | NTP_transferase | Hexapep_GlmU |
| pfam | MGYG000003161_12 | MGYG000003161_12_27 | 27710 | 28834 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | MGYG000003161_12 | MGYG000003161_12_28 | 28854 | 30275 | + | GT5 |
| pfam | MGYG000003161_12 | MGYG000003161_12_29 | 30349 | 32496 | - | S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region |
| TC | MGYG000003161_12 | MGYG000003161_12_30 | 32506 | 33444 | - | 1.A.35.3.2 |
Gene ID: MGYG000003161_12_25
Type: CAZyme
Location: 24599 - 26479 (+)
Type: CAZyme
Location: 24599 - 26479 (+)
Gene ID: MGYG000003161_12_26
Type: pfam
Location: 26499 - 27707 (+)
Type: pfam
Location: 26499 - 27707 (+)
Gene ID: MGYG000003161_12_27
Type: pfam
Location: 27710 - 28834 (+)
Type: pfam
Location: 27710 - 28834 (+)
Gene ID: MGYG000003161_12_28
Type: CAZyme
Location: 28854 - 30275 (+)
Type: CAZyme
Location: 28854 - 30275 (+)
Gene ID: MGYG000003161_12_29
Type: pfam
Location: 30349 - 32496 (-)
Type: pfam
Location: 30349 - 32496 (-)
Gene ID: MGYG000003161_12_30
Type: TC
Location: 32506 - 33444 (-)
Type: TC
Location: 32506 - 33444 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900540305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.