Cluster: MGYG000003119_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003119
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003119_35 | MGYG000003119_35_18 | 18223 | 18993 | + | 2.A.79.2.1 |
| pfam | MGYG000003119_35 | MGYG000003119_35_19 | 18980 | 19561 | + | ThrE_2 |
| pfam | MGYG000003119_35 | MGYG000003119_35_20 | 19586 | 20311 | + | Ala_racemase_N |
| TC | MGYG000003119_35 | MGYG000003119_35_21 | 20735 | 22027 | + | 2.A.1.7.2 |
| pfam | MGYG000003119_35 | MGYG000003119_35_22 | 22285 | 23502 | + | ketoacyl-synt | Ketoacyl-synt_C |
| CAZyme | MGYG000003119_35 | MGYG000003119_35_23 | 23492 | 25612 | - | GH92 |
Gene ID: MGYG000003119_35_18
Type: TC
Location: 18223 - 18993 (+)
Type: TC
Location: 18223 - 18993 (+)
Gene ID: MGYG000003119_35_19
Type: pfam
Location: 18980 - 19561 (+)
Type: pfam
Location: 18980 - 19561 (+)
Gene ID: MGYG000003119_35_20
Type: pfam
Location: 19586 - 20311 (+)
Type: pfam
Location: 19586 - 20311 (+)
Gene ID: MGYG000003119_35_21
Type: TC
Location: 20735 - 22027 (+)
Type: TC
Location: 20735 - 22027 (+)
Gene ID: MGYG000003119_35_22
Type: pfam
Location: 22285 - 23502 (+)
Type: pfam
Location: 22285 - 23502 (+)
Gene ID: MGYG000003119_35_23
Type: CAZyme
Location: 23492 - 25612 (-)
Type: CAZyme
Location: 23492 - 25612 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Capnocytophaga
Species
Capnocytophaga ochracea
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.