Cluster: MGYG000002787_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002787
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002787_96 | MGYG000002787_96_1 | 809 | 1543 | - | GT2 |
| TF | MGYG000002787_96 | MGYG000002787_96_2 | 1674 | 2330 | - | GntR |
| TC | MGYG000002787_96 | MGYG000002787_96_3 | 2522 | 2839 | + | 4.A.3.2.4 |
| TC | MGYG000002787_96 | MGYG000002787_96_4 | 2940 | 3287 | + | 4.A.3.2.8 |
| CAZyme | MGYG000002787_96 | MGYG000002787_96_5 | 3477 | 4916 | + | GH1 |
| CAZyme | MGYG000002787_96 | MGYG000002787_96_6 | 4934 | 6376 | + | GH1 |
Gene ID: MGYG000002787_96_1
Type: CAZyme
Location: 809 - 1543 (-)
Type: CAZyme
Location: 809 - 1543 (-)
Gene ID: MGYG000002787_96_2
Type: TF
Location: 1674 - 2330 (-)
Type: TF
Location: 1674 - 2330 (-)
Gene ID: MGYG000002787_96_3
Type: TC
Location: 2522 - 2839 (+)
Type: TC
Location: 2522 - 2839 (+)
Gene ID: MGYG000002787_96_4
Type: TC
Location: 2940 - 3287 (+)
Type: TC
Location: 2940 - 3287 (+)
Gene ID: MGYG000002787_96_5
Type: CAZyme
Location: 3477 - 4916 (+)
Type: CAZyme
Location: 3477 - 4916 (+)
Gene ID: MGYG000002787_96_6
Type: CAZyme
Location: 4934 - 6376 (+)
Type: CAZyme
Location: 4934 - 6376 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactiplantibacillus
Species
Lactiplantibacillus pentosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.