Cluster: MGYG000002787_CGC10
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002787
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002787_6 | MGYG000002787_6_101 | 107277 | 108821 | + | GT4 |
| CAZyme | MGYG000002787_6 | MGYG000002787_6_102 | 108818 | 110326 | + | GT4 |
| NULL(UNKNOWN) | MGYG000002787_6 | MGYG000002787_6_103 | 110638 | 111255 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000002787_6 | MGYG000002787_6_104 | 111406 | 112236 | - | HTH_1 |
| TC | MGYG000002787_6 | MGYG000002787_6_105 | 112353 | 113363 | + | 2.A.98.1.3 |
| pfam | MGYG000002787_6 | MGYG000002787_6_106 | 113451 | 114008 | + | Acetyltransf_1 | Acetyltransf_3 |
| pfam | MGYG000002787_6 | MGYG000002787_6_107 | 115037 | 115537 | - | DUF4811 |
| TC | MGYG000002787_6 | MGYG000002787_6_108 | 115534 | 117018 | - | 2.A.1.3.61 |
| TC | MGYG000002787_6 | MGYG000002787_6_109 | 117302 | 118489 | + | 2.A.1.36.3 |
Gene ID: MGYG000002787_6_101
Type: CAZyme
Location: 107277 - 108821 (+)
Type: CAZyme
Location: 107277 - 108821 (+)
Gene ID: MGYG000002787_6_102
Type: CAZyme
Location: 108818 - 110326 (+)
Type: CAZyme
Location: 108818 - 110326 (+)
Gene ID: MGYG000002787_6_103
Type:
Location: 110638 - 111255 (+)
Type:
Location: 110638 - 111255 (+)
Gene ID: MGYG000002787_6_104
Type: TF
Location: 111406 - 112236 (-)
Type: TF
Location: 111406 - 112236 (-)
Gene ID: MGYG000002787_6_105
Type: TC
Location: 112353 - 113363 (+)
Type: TC
Location: 112353 - 113363 (+)
Gene ID: MGYG000002787_6_106
Type: pfam
Location: 113451 - 114008 (+)
Type: pfam
Location: 113451 - 114008 (+)
Gene ID: MGYG000002787_6_107
Type: pfam
Location: 115037 - 115537 (-)
Type: pfam
Location: 115037 - 115537 (-)
Gene ID: MGYG000002787_6_108
Type: TC
Location: 115534 - 117018 (-)
Type: TC
Location: 115534 - 117018 (-)
Gene ID: MGYG000002787_6_109
Type: TC
Location: 117302 - 118489 (+)
Type: TC
Location: 117302 - 118489 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactiplantibacillus
Species
Lactiplantibacillus pentosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.