Cluster: MGYG000002779_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002779
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002779_19 | MGYG000002779_19_46 | 45833 | 47230 | + | AA4 |
| TF | MGYG000002779_19 | MGYG000002779_19_47 | 47466 | 48074 | + | MerR |
| TC | MGYG000002779_19 | MGYG000002779_19_48 | 48481 | 49179 | + | 3.A.1.122.7 |
| pfam | MGYG000002779_19 | MGYG000002779_19_49 | 49182 | 50891 | + | HlyD_3 | HlyD_D23 |
| TC | MGYG000002779_19 | MGYG000002779_19_50 | 50904 | 52121 | + | 3.A.1.122.2 |
Gene ID: MGYG000002779_19_46
Type: CAZyme
Location: 45833 - 47230 (+)
Type: CAZyme
Location: 45833 - 47230 (+)
Gene ID: MGYG000002779_19_47
Type: TF
Location: 47466 - 48074 (+)
Type: TF
Location: 47466 - 48074 (+)
Gene ID: MGYG000002779_19_48
Type: TC
Location: 48481 - 49179 (+)
Type: TC
Location: 48481 - 49179 (+)
Gene ID: MGYG000002779_19_49
Type: pfam
Location: 49182 - 50891 (+)
Type: pfam
Location: 49182 - 50891 (+)
Gene ID: MGYG000002779_19_50
Type: TC
Location: 50904 - 52121 (+)
Type: TC
Location: 50904 - 52121 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania sp900120005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.