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Cluster: MGYG000002779_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002779_8 MGYG000002779_8_45 45862 46278 + 4.A.6.1.19
TC MGYG000002779_8 MGYG000002779_8_46 46335 46835 + 4.A.6.1.19
TC MGYG000002779_8 MGYG000002779_8_47 46848 47648 + 4.A.6.1.22
TC MGYG000002779_8 MGYG000002779_8_48 47641 48456 + 4.A.6.1.19
CAZyme MGYG000002779_8 MGYG000002779_8_49 48469 49665 + CE9
pfam MGYG000002779_8 MGYG000002779_8_50 50171 52903 + Sigma54_activat | PRD | EIIA-man
TC MGYG000002779_8 MGYG000002779_8_51 52922 53335 + 4.A.6.1.19
TC MGYG000002779_8 MGYG000002779_8_52 53414 53914 + 4.A.6.1.16
TC MGYG000002779_8 MGYG000002779_8_53 53927 54724 + 4.A.6.1.19
TC MGYG000002779_8 MGYG000002779_8_54 54717 55529 + 4.A.6.1.19
CAZyme MGYG000002779_8 MGYG000002779_8_55 55597 56814 + CE9
CAZyme MGYG000002779_8 MGYG000002779_8_56 56836 58038 + CE9
pfam MGYG000002779_8 MGYG000002779_8_57 58208 58669 - DUF3021
TF MGYG000002779_8 MGYG000002779_8_58 58679 59119 - LytTR
TC MGYG000002779_8 MGYG000002779_8_59 59391 60776 + 2.A.22.5.3
Gene ID: MGYG000002779_8_45
Type: TC
Location: 45862 - 46278 (+)
Gene ID: MGYG000002779_8_46
Type: TC
Location: 46335 - 46835 (+)
Gene ID: MGYG000002779_8_47
Type: TC
Location: 46848 - 47648 (+)
Gene ID: MGYG000002779_8_48
Type: TC
Location: 47641 - 48456 (+)
Gene ID: MGYG000002779_8_49
Type: CAZyme
Location: 48469 - 49665 (+)
Gene ID: MGYG000002779_8_50
Type: pfam
Location: 50171 - 52903 (+)
Gene ID: MGYG000002779_8_51
Type: TC
Location: 52922 - 53335 (+)
Gene ID: MGYG000002779_8_52
Type: TC
Location: 53414 - 53914 (+)
Gene ID: MGYG000002779_8_53
Type: TC
Location: 53927 - 54724 (+)
Gene ID: MGYG000002779_8_54
Type: TC
Location: 54717 - 55529 (+)
Gene ID: MGYG000002779_8_55
Type: CAZyme
Location: 55597 - 56814 (+)
Gene ID: MGYG000002779_8_56
Type: CAZyme
Location: 56836 - 58038 (+)
Gene ID: MGYG000002779_8_57
Type: pfam
Location: 58208 - 58669 (-)
Gene ID: MGYG000002779_8_58
Type: TF
Location: 58679 - 59119 (-)
Gene ID: MGYG000002779_8_59
Type: TC
Location: 59391 - 60776 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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