Cluster: MGYG000002779_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002779
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002779_6 | MGYG000002779_6_115 | 116048 | 117499 | - | GH1 |
| pfam | MGYG000002779_6 | MGYG000002779_6_116 | 117521 | 117886 | - | PTS_IIA |
| TC | MGYG000002779_6 | MGYG000002779_6_117 | 117975 | 119219 | - | 4.A.3.2.8 |
| TC | MGYG000002779_6 | MGYG000002779_6_118 | 119242 | 119571 | - | 4.A.3.2.3 |
| TF | MGYG000002779_6 | MGYG000002779_6_119 | 119767 | 121662 | + | HTH_11 | Mga |
| TC | MGYG000002779_6 | MGYG000002779_6_120 | 122006 | 122590 | - | 2.A.115.2.14 |
Gene ID: MGYG000002779_6_115
Type: CAZyme
Location: 116048 - 117499 (-)
Type: CAZyme
Location: 116048 - 117499 (-)
Gene ID: MGYG000002779_6_116
Type: pfam
Location: 117521 - 117886 (-)
Type: pfam
Location: 117521 - 117886 (-)
Gene ID: MGYG000002779_6_117
Type: TC
Location: 117975 - 119219 (-)
Type: TC
Location: 117975 - 119219 (-)
Gene ID: MGYG000002779_6_118
Type: TC
Location: 119242 - 119571 (-)
Type: TC
Location: 119242 - 119571 (-)
Gene ID: MGYG000002779_6_119
Type: TF
Location: 119767 - 121662 (+)
Type: TF
Location: 119767 - 121662 (+)
Gene ID: MGYG000002779_6_120
Type: TC
Location: 122006 - 122590 (-)
Type: TC
Location: 122006 - 122590 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania sp900120005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.