Cluster: MGYG000002580_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002580
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002580_1 | MGYG000002580_1_213 | 228764 | 229708 | + | CE4 |
| pfam | MGYG000002580_1 | MGYG000002580_1_214 | 229780 | 230643 | - | Aldose_epim |
| TF | MGYG000002580_1 | MGYG000002580_1_215 | 230788 | 231609 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000002580_1 | MGYG000002580_1_216 | 231802 | 233181 | + | 2.A.2.3.4 |
Gene ID: MGYG000002580_1_213
Type: CAZyme
Location: 228764 - 229708 (+)
Type: CAZyme
Location: 228764 - 229708 (+)
Gene ID: MGYG000002580_1_214
Type: pfam
Location: 229780 - 230643 (-)
Type: pfam
Location: 229780 - 230643 (-)
Gene ID: MGYG000002580_1_215
Type: TF
Location: 230788 - 231609 (-)
Type: TF
Location: 230788 - 231609 (-)
Gene ID: MGYG000002580_1_216
Type: TC
Location: 231802 - 233181 (+)
Type: TC
Location: 231802 - 233181 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000436475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.