Cluster: MGYG000002580_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002580
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002580_2 | MGYG000002580_2_279 | 314591 | 317158 | + | 3.A.5.1.3 |
| pfam | MGYG000002580_2 | MGYG000002580_2_280 | 317366 | 318493 | + | RF-1 | PCRF |
| STP | MGYG000002580_2 | MGYG000002580_2_281 | 318523 | 318990 | + | CheW |
| CAZyme | MGYG000002580_2 | MGYG000002580_2_282 | 319034 | 320653 | + | GH77 |
Gene ID: MGYG000002580_2_279
Type: TC
Location: 314591 - 317158 (+)
Type: TC
Location: 314591 - 317158 (+)
Gene ID: MGYG000002580_2_280
Type: pfam
Location: 317366 - 318493 (+)
Type: pfam
Location: 317366 - 318493 (+)
Gene ID: MGYG000002580_2_281
Type: STP
Location: 318523 - 318990 (+)
Type: STP
Location: 318523 - 318990 (+)
Gene ID: MGYG000002580_2_282
Type: CAZyme
Location: 319034 - 320653 (+)
Type: CAZyme
Location: 319034 - 320653 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000436475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002580_2_281 | vegetarian > vegan | 1.03795 | 0.00536 |
| MGYG000002580_2_282 | vegetarian > vegan | 1.15061 | 0.00536 |