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Cluster: MGYG000002560_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002560_1 MGYG000002560_1_339 442127 445207 - GH2
TC MGYG000002560_1 MGYG000002560_1_340 445336 446208 + 1.A.1.24.3
CAZyme MGYG000002560_1 MGYG000002560_1_341 446209 447207 - GH23
TF MGYG000002560_1 MGYG000002560_1_342 447215 448135 - HTH_AraC | HTH_AraC
TF MGYG000002560_1 MGYG000002560_1_343 448364 452461 + HTH_AraC
TC MGYG000002560_1 MGYG000002560_1_344 452608 455682 + 1.B.14.6.1
pfam MGYG000002560_1 MGYG000002560_1_345 455694 457313 + SusD_RagB | SusD-like_3
CAZyme MGYG000002560_1 MGYG000002560_1_346 457397 458914 + GH136
Gene ID: MGYG000002560_1_339
Type: CAZyme
Location: 442127 - 445207 (-)
Gene ID: MGYG000002560_1_340
Type: TC
Location: 445336 - 446208 (+)
Gene ID: MGYG000002560_1_341
Type: CAZyme
Location: 446209 - 447207 (-)
Gene ID: MGYG000002560_1_342
Type: TF
Location: 447215 - 448135 (-)
Gene ID: MGYG000002560_1_343
Type: TF
Location: 448364 - 452461 (+)
Gene ID: MGYG000002560_1_344
Type: TC
Location: 452608 - 455682 (+)
Gene ID: MGYG000002560_1_345
Type: pfam
Location: 455694 - 457313 (+)
Gene ID: MGYG000002560_1_346
Type: CAZyme
Location: 457397 - 458914 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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