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Cluster: MGYG000002560_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002560_23 MGYG000002560_23_49 60964 62484 - GH29
pfam MGYG000002560_23 MGYG000002560_23_50 62507 62890 - rhaM
pfam MGYG000002560_23 MGYG000002560_23_51 63243 64775 - SusD_RagB | SusD-like_3
TC MGYG000002560_23 MGYG000002560_23_52 64786 67989 - 1.B.14.6.1
TF MGYG000002560_23 MGYG000002560_23_53 68306 69166 + HTH_AraC | HTH_AraC
TF MGYG000002560_23 MGYG000002560_23_54 69172 70188 - LacI
TC MGYG000002560_23 MGYG000002560_23_55 70338 71270 + 8.A.5.1.6
pfam MGYG000002560_23 MGYG000002560_23_56 71286 72209 + Amidohydro_2
sulfatase MGYG000002560_23 MGYG000002560_23_57 72228 73244 + S1_16
TC MGYG000002560_23 MGYG000002560_23_58 73341 73985 - 2.A.95.1.4
Gene ID: MGYG000002560_23_49
Type: CAZyme
Location: 60964 - 62484 (-)
Gene ID: MGYG000002560_23_50
Type: pfam
Location: 62507 - 62890 (-)
Gene ID: MGYG000002560_23_51
Type: pfam
Location: 63243 - 64775 (-)
Gene ID: MGYG000002560_23_52
Type: TC
Location: 64786 - 67989 (-)
Gene ID: MGYG000002560_23_53
Type: TF
Location: 68306 - 69166 (+)
Gene ID: MGYG000002560_23_54
Type: TF
Location: 69172 - 70188 (-)
Gene ID: MGYG000002560_23_55
Type: TC
Location: 70338 - 71270 (+)
Gene ID: MGYG000002560_23_56
Type: pfam
Location: 71286 - 72209 (+)
Gene ID: MGYG000002560_23_57
Type: sulfatase
Location: 72228 - 73244 (+)
Gene ID: MGYG000002560_23_58
Type: TC
Location: 73341 - 73985 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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