Cluster: MGYG000002560_CGC56
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000002560
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002560_21 | MGYG000002560_21_27 | 25555 | 27789 | - | GH139 |
| CAZyme | MGYG000002560_21 | MGYG000002560_21_28 | 27803 | 29227 | - | CE20 |
| CAZyme | MGYG000002560_21 | MGYG000002560_21_29 | 29235 | 32459 | - | GH106 |
| NULL(UNKNOWN) | MGYG000002560_21 | MGYG000002560_21_30 | 32712 | 32987 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002560_21 | MGYG000002560_21_31 | 32928 | 35771 | - | GH2 |
| CAZyme | MGYG000002560_21 | MGYG000002560_21_32 | 36085 | 39285 | - | GH2 |
| TC | MGYG000002560_21 | MGYG000002560_21_33 | 39554 | 41152 | - | 2.A.81.1.2 |
| CAZyme | MGYG000002560_21 | MGYG000002560_21_34 | 41381 | 45709 | - | CBM57 | CBM97 | GH137 | GH2 |
| CAZyme | MGYG000002560_21 | MGYG000002560_21_35 | 45715 | 48420 | - | GH138 |
| pfam | MGYG000002560_21 | MGYG000002560_21_36 | 48589 | 49530 | + | Phage_integrase | Phage_int_SAM_5 |
| TC | MGYG000002560_21 | MGYG000002560_21_37 | 49966 | 51369 | + | 9.B.18.1.1 |
| pfam | MGYG000002560_21 | MGYG000002560_21_38 | 51422 | 52213 | + | Poly_export | SLBB | SLBB_2 |
| TC | MGYG000002560_21 | MGYG000002560_21_39 | 52223 | 54631 | + | 8.A.3.3.4 |
Gene ID: MGYG000002560_21_27
Type: CAZyme
Location: 25555 - 27789 (-)
Type: CAZyme
Location: 25555 - 27789 (-)
Gene ID: MGYG000002560_21_28
Type: CAZyme
Location: 27803 - 29227 (-)
Type: CAZyme
Location: 27803 - 29227 (-)
Gene ID: MGYG000002560_21_29
Type: CAZyme
Location: 29235 - 32459 (-)
Type: CAZyme
Location: 29235 - 32459 (-)
Gene ID: MGYG000002560_21_30
Type:
Location: 32712 - 32987 (+)
Type:
Location: 32712 - 32987 (+)
Gene ID: MGYG000002560_21_31
Type: CAZyme
Location: 32928 - 35771 (-)
Type: CAZyme
Location: 32928 - 35771 (-)
Gene ID: MGYG000002560_21_32
Type: CAZyme
Location: 36085 - 39285 (-)
Type: CAZyme
Location: 36085 - 39285 (-)
Gene ID: MGYG000002560_21_33
Type: TC
Location: 39554 - 41152 (-)
Type: TC
Location: 39554 - 41152 (-)
Gene ID: MGYG000002560_21_34
Type: CAZyme
Location: 41381 - 45709 (-)
Type: CAZyme
Location: 41381 - 45709 (-)
Gene ID: MGYG000002560_21_35
Type: CAZyme
Location: 45715 - 48420 (-)
Type: CAZyme
Location: 45715 - 48420 (-)
Gene ID: MGYG000002560_21_36
Type: pfam
Location: 48589 - 49530 (+)
Type: pfam
Location: 48589 - 49530 (+)
Gene ID: MGYG000002560_21_37
Type: TC
Location: 49966 - 51369 (+)
Type: TC
Location: 49966 - 51369 (+)
Gene ID: MGYG000002560_21_38
Type: pfam
Location: 51422 - 52213 (+)
Type: pfam
Location: 51422 - 52213 (+)
Gene ID: MGYG000002560_21_39
Type: TC
Location: 52223 - 54631 (+)
Type: TC
Location: 52223 - 54631 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp902388365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.