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Cluster: MGYG000002560_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002560_10 MGYG000002560_10_58 73293 76337 - 1.B.14.6.1
TF MGYG000002560_10 MGYG000002560_10_59 76384 77004 + GerE
TC MGYG000002560_10 MGYG000002560_10_60 77194 77511 + 1.B.14.6.1
NULL(UNKNOWN) MGYG000002560_10 MGYG000002560_10_61 77755 78261 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) MGYG000002560_10 MGYG000002560_10_62 78314 79642 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000002560_10 MGYG000002560_10_63 79830 81734 + PL33_1
CAZyme MGYG000002560_10 MGYG000002560_10_64 81736 82947 + GH88
CAZyme MGYG000002560_10 MGYG000002560_10_65 82953 84194 + GH154
pfam MGYG000002560_10 MGYG000002560_10_66 84558 85052 - AhpC-TSA | Redoxin | Thioredoxin_8
STP MGYG000002560_10 MGYG000002560_10_67 85325 86557 + ACT
TC MGYG000002560_10 MGYG000002560_10_68 86578 87846 + 3.A.18.1.1
Gene ID: MGYG000002560_10_58
Type: TC
Location: 73293 - 76337 (-)
Gene ID: MGYG000002560_10_59
Type: TF
Location: 76384 - 77004 (+)
Gene ID: MGYG000002560_10_60
Type: TC
Location: 77194 - 77511 (+)
Gene ID: MGYG000002560_10_61
Type:
Location: 77755 - 78261 (+)
Gene ID: MGYG000002560_10_62
Type:
Location: 78314 - 79642 (+)
Gene ID: MGYG000002560_10_63
Type: CAZyme
Location: 79830 - 81734 (+)
Gene ID: MGYG000002560_10_64
Type: CAZyme
Location: 81736 - 82947 (+)
Gene ID: MGYG000002560_10_65
Type: CAZyme
Location: 82953 - 84194 (+)
Gene ID: MGYG000002560_10_66
Type: pfam
Location: 84558 - 85052 (-)
Gene ID: MGYG000002560_10_67
Type: STP
Location: 85325 - 86557 (+)
Gene ID: MGYG000002560_10_68
Type: TC
Location: 86578 - 87846 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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