Cluster: MGYG000002560_CGC41
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000002560
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002560_10 | MGYG000002560_10_9 | 4715 | 5821 | - | GT4 |
| CAZyme | MGYG000002560_10 | MGYG000002560_10_10 | 5823 | 6806 | - | GT2 |
| pfam | MGYG000002560_10 | MGYG000002560_10_11 | 6825 | 7703 | - | LicD |
| pfam | MGYG000002560_10 | MGYG000002560_10_12 | 7700 | 8446 | - | adh_short | adh_short_C2 |
| CAZyme | MGYG000002560_10 | MGYG000002560_10_13 | 8449 | 9798 | - | GH109 |
| NULL(UNKNOWN) | MGYG000002560_10 | MGYG000002560_10_14 | 9872 | 10027 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002560_10 | MGYG000002560_10_15 | 10033 | 11031 | - | GT2 |
| CAZyme | MGYG000002560_10 | MGYG000002560_10_16 | 11045 | 11884 | - | GT2 |
| NULL(UNKNOWN) | MGYG000002560_10 | MGYG000002560_10_17 | 11937 | 13250 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000002560_10 | MGYG000002560_10_18 | 13279 | 13884 | - | Hexapep |
| CAZyme | MGYG000002560_10 | MGYG000002560_10_19 | 13891 | 14733 | - | GT111 |
| TC | MGYG000002560_10 | MGYG000002560_10_20 | 14745 | 16202 | - | 2.A.66.2.9 |
Gene ID: MGYG000002560_10_9
Type: CAZyme
Location: 4715 - 5821 (-)
Type: CAZyme
Location: 4715 - 5821 (-)
Gene ID: MGYG000002560_10_10
Type: CAZyme
Location: 5823 - 6806 (-)
Type: CAZyme
Location: 5823 - 6806 (-)
Gene ID: MGYG000002560_10_11
Type: pfam
Location: 6825 - 7703 (-)
Type: pfam
Location: 6825 - 7703 (-)
Gene ID: MGYG000002560_10_12
Type: pfam
Location: 7700 - 8446 (-)
Type: pfam
Location: 7700 - 8446 (-)
Gene ID: MGYG000002560_10_13
Type: CAZyme
Location: 8449 - 9798 (-)
Type: CAZyme
Location: 8449 - 9798 (-)
Gene ID: MGYG000002560_10_14
Type:
Location: 9872 - 10027 (-)
Type:
Location: 9872 - 10027 (-)
Gene ID: MGYG000002560_10_15
Type: CAZyme
Location: 10033 - 11031 (-)
Type: CAZyme
Location: 10033 - 11031 (-)
Gene ID: MGYG000002560_10_16
Type: CAZyme
Location: 11045 - 11884 (-)
Type: CAZyme
Location: 11045 - 11884 (-)
Gene ID: MGYG000002560_10_17
Type:
Location: 11937 - 13250 (-)
Type:
Location: 11937 - 13250 (-)
Gene ID: MGYG000002560_10_18
Type: pfam
Location: 13279 - 13884 (-)
Type: pfam
Location: 13279 - 13884 (-)
Gene ID: MGYG000002560_10_19
Type: CAZyme
Location: 13891 - 14733 (-)
Type: CAZyme
Location: 13891 - 14733 (-)
Gene ID: MGYG000002560_10_20
Type: TC
Location: 14745 - 16202 (-)
Type: TC
Location: 14745 - 16202 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp902388365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.