Cluster: MGYG000002560_CGC18
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000002560
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002560_2 | MGYG000002560_2_131 | 185979 | 187658 | - | 8.A.46.1.1 |
| TC | MGYG000002560_2 | MGYG000002560_2_132 | 187679 | 190711 | - | 1.B.14.6.1 |
| CAZyme | MGYG000002560_2 | MGYG000002560_2_133 | 190741 | 193176 | - | GH127 |
| NULL(UNKNOWN) | MGYG000002560_2 | MGYG000002560_2_134 | 193266 | 193385 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000002560_2 | MGYG000002560_2_135 | 193601 | 197587 | + | HTH_AraC |
| CAZyme | MGYG000002560_2 | MGYG000002560_2_136 | 197700 | 200258 | - | GH3 |
| CAZyme | MGYG000002560_2 | MGYG000002560_2_137 | 200795 | 204052 | + | GH67 | GH8 |
| CAZyme | MGYG000002560_2 | MGYG000002560_2_138 | 204177 | 206426 | - | GH92 |
| pfam | MGYG000002560_2 | MGYG000002560_2_139 | 206431 | 207249 | - | BSP |
| CAZyme | MGYG000002560_2 | MGYG000002560_2_140 | 207281 | 209605 | - | GH92 |
| pfam | MGYG000002560_2 | MGYG000002560_2_141 | 209695 | 211065 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000002560_2 | MGYG000002560_2_142 | 211085 | 214204 | - | 1.B.14.6.1 |
| TF | MGYG000002560_2 | MGYG000002560_2_143 | 214776 | 218747 | - | HTH_AraC |
| pfam | MGYG000002560_2 | MGYG000002560_2_144 | 219122 | 219700 | - | Ferritin | Rubrerythrin | RUBY_RBDX |
| TC | MGYG000002560_2 | MGYG000002560_2_145 | 219959 | 221641 | + | 2.A.53.3.9 |
| pfam | MGYG000002560_2 | MGYG000002560_2_146 | 221683 | 223008 | - | OEP | OEP |
| TC | MGYG000002560_2 | MGYG000002560_2_147 | 223112 | 225283 | - | 3.A.1.112.9 |
Gene ID: MGYG000002560_2_131
Type: TC
Location: 185979 - 187658 (-)
Type: TC
Location: 185979 - 187658 (-)
Gene ID: MGYG000002560_2_132
Type: TC
Location: 187679 - 190711 (-)
Type: TC
Location: 187679 - 190711 (-)
Gene ID: MGYG000002560_2_133
Type: CAZyme
Location: 190741 - 193176 (-)
Type: CAZyme
Location: 190741 - 193176 (-)
Gene ID: MGYG000002560_2_134
Type:
Location: 193266 - 193385 (-)
Type:
Location: 193266 - 193385 (-)
Gene ID: MGYG000002560_2_135
Type: TF
Location: 193601 - 197587 (+)
Type: TF
Location: 193601 - 197587 (+)
Gene ID: MGYG000002560_2_136
Type: CAZyme
Location: 197700 - 200258 (-)
Type: CAZyme
Location: 197700 - 200258 (-)
Gene ID: MGYG000002560_2_137
Type: CAZyme
Location: 200795 - 204052 (+)
Type: CAZyme
Location: 200795 - 204052 (+)
Gene ID: MGYG000002560_2_138
Type: CAZyme
Location: 204177 - 206426 (-)
Type: CAZyme
Location: 204177 - 206426 (-)
Gene ID: MGYG000002560_2_139
Type: pfam
Location: 206431 - 207249 (-)
Type: pfam
Location: 206431 - 207249 (-)
Gene ID: MGYG000002560_2_140
Type: CAZyme
Location: 207281 - 209605 (-)
Type: CAZyme
Location: 207281 - 209605 (-)
Gene ID: MGYG000002560_2_141
Type: pfam
Location: 209695 - 211065 (-)
Type: pfam
Location: 209695 - 211065 (-)
Gene ID: MGYG000002560_2_142
Type: TC
Location: 211085 - 214204 (-)
Type: TC
Location: 211085 - 214204 (-)
Gene ID: MGYG000002560_2_143
Type: TF
Location: 214776 - 218747 (-)
Type: TF
Location: 214776 - 218747 (-)
Gene ID: MGYG000002560_2_144
Type: pfam
Location: 219122 - 219700 (-)
Type: pfam
Location: 219122 - 219700 (-)
Gene ID: MGYG000002560_2_145
Type: TC
Location: 219959 - 221641 (+)
Type: TC
Location: 219959 - 221641 (+)
Gene ID: MGYG000002560_2_146
Type: pfam
Location: 221683 - 223008 (-)
Type: pfam
Location: 221683 - 223008 (-)
Gene ID: MGYG000002560_2_147
Type: TC
Location: 223112 - 225283 (-)
Type: TC
Location: 223112 - 225283 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp902388365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.