Cluster: MGYG000002082_CGC9
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002082
- CGC Family ID: CGCFAM_00632
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002082_3 | MGYG000002082_3_85 | 94498 | 96753 | - | GH3 |
| NULL(UNKNOWN) | MGYG000002082_3 | MGYG000002082_3_86 | 96763 | 98016 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002082_3 | MGYG000002082_3_87 | 98041 | 99720 | - | 8.A.46.2.1 |
| TC | MGYG000002082_3 | MGYG000002082_3_88 | 99741 | 102944 | - | 1.B.14.6.2 |
| STP | MGYG000002082_3 | MGYG000002082_3_89 | 103135 | 105417 | + | Reg_prop | Y_Y_Y |
| TF | MGYG000002082_3 | MGYG000002082_3_90 | 105517 | 107031 | + | HTH_AraC |
| CAZyme | MGYG000002082_3 | MGYG000002082_3_91 | 107150 | 108622 | + | GH5_4 |
| pfam | MGYG000002082_3 | MGYG000002082_3_92 | 109171 | 109971 | - | Transposase_mut |
| CAZyme | MGYG000002082_3 | MGYG000002082_3_93 | 110181 | 111389 | - | GH171 |
| NULL(UNKNOWN) | MGYG000002082_3 | MGYG000002082_3_94 | 111491 | 112381 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000002082_3 | MGYG000002082_3_95 | 112568 | 113680 | - | RF-1 | PCRF |
| TC | MGYG000002082_3 | MGYG000002082_3_96 | 113698 | 114333 | - | 2.A.115.2.14 |
| TC | MGYG000002082_3 | MGYG000002082_3_97 | 114330 | 115715 | - | 2.A.66.1.32 |
| NULL(UNKNOWN) | MGYG000002082_3 | MGYG000002082_3_98 | 115765 | 116277 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000002082_3 | MGYG000002082_3_99 | 116290 | 117765 | - | tRNA-synt_1e | DALR_2 | tRNA-synt_1g | CysS_C |
| TC | MGYG000002082_3 | MGYG000002082_3_100 | 118012 | 119538 | + | 1.I.1.1.3 |
| pfam | MGYG000002082_3 | MGYG000002082_3_101 | 119638 | 122868 | + | TMEM260-like |
| pfam | MGYG000002082_3 | MGYG000002082_3_102 | 123072 | 123566 | + | Flavodoxin_1 | Flavodoxin_5 |
| TC | MGYG000002082_3 | MGYG000002082_3_103 | 123669 | 125354 | - | 4.C.1.1.14 |
Gene ID: MGYG000002082_3_85
Type: CAZyme
Location: 94498 - 96753 (-)
Type: CAZyme
Location: 94498 - 96753 (-)
Gene ID: MGYG000002082_3_86
Type:
Location: 96763 - 98016 (-)
Type:
Location: 96763 - 98016 (-)
Gene ID: MGYG000002082_3_87
Type: TC
Location: 98041 - 99720 (-)
Type: TC
Location: 98041 - 99720 (-)
Gene ID: MGYG000002082_3_88
Type: TC
Location: 99741 - 102944 (-)
Type: TC
Location: 99741 - 102944 (-)
Gene ID: MGYG000002082_3_89
Type: STP
Location: 103135 - 105417 (+)
Type: STP
Location: 103135 - 105417 (+)
Gene ID: MGYG000002082_3_90
Type: TF
Location: 105517 - 107031 (+)
Type: TF
Location: 105517 - 107031 (+)
Gene ID: MGYG000002082_3_91
Type: CAZyme
Location: 107150 - 108622 (+)
Type: CAZyme
Location: 107150 - 108622 (+)
Gene ID: MGYG000002082_3_92
Type: pfam
Location: 109171 - 109971 (-)
Type: pfam
Location: 109171 - 109971 (-)
Gene ID: MGYG000002082_3_93
Type: CAZyme
Location: 110181 - 111389 (-)
Type: CAZyme
Location: 110181 - 111389 (-)
Gene ID: MGYG000002082_3_94
Type:
Location: 111491 - 112381 (+)
Type:
Location: 111491 - 112381 (+)
Gene ID: MGYG000002082_3_95
Type: pfam
Location: 112568 - 113680 (-)
Type: pfam
Location: 112568 - 113680 (-)
Gene ID: MGYG000002082_3_96
Type: TC
Location: 113698 - 114333 (-)
Type: TC
Location: 113698 - 114333 (-)
Gene ID: MGYG000002082_3_97
Type: TC
Location: 114330 - 115715 (-)
Type: TC
Location: 114330 - 115715 (-)
Gene ID: MGYG000002082_3_98
Type:
Location: 115765 - 116277 (-)
Type:
Location: 115765 - 116277 (-)
Gene ID: MGYG000002082_3_99
Type: pfam
Location: 116290 - 117765 (-)
Type: pfam
Location: 116290 - 117765 (-)
Gene ID: MGYG000002082_3_100
Type: TC
Location: 118012 - 119538 (+)
Type: TC
Location: 118012 - 119538 (+)
Gene ID: MGYG000002082_3_101
Type: pfam
Location: 119638 - 122868 (+)
Type: pfam
Location: 119638 - 122868 (+)
Gene ID: MGYG000002082_3_102
Type: pfam
Location: 123072 - 123566 (+)
Type: pfam
Location: 123072 - 123566 (+)
Gene ID: MGYG000002082_3_103
Type: TC
Location: 123669 - 125354 (-)
Type: TC
Location: 123669 - 125354 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002082_3_92 | vegan > omnivore | 4.50000 | 0.04901 |