Cluster: MGYG000002082_CGC26
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002082
- CGC Family ID: CGCFAM_00475
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002082_11 | MGYG000002082_11_46 | 65273 | 65623 | + | 3.D.1.8.1 |
| TC | MGYG000002082_11 | MGYG000002082_11_47 | 65614 | 66270 | + | 3.D.1.3.1 |
| TC | MGYG000002082_11 | MGYG000002082_11_48 | 66263 | 67882 | + | 3.D.1.5.1 |
| TC | MGYG000002082_11 | MGYG000002082_11_49 | 67900 | 68976 | + | 3.D.1.5.1 |
| STP | MGYG000002082_11 | MGYG000002082_11_50 | 68979 | 69416 | + | Fer4 | Fer4 |
| TC | MGYG000002082_11 | MGYG000002082_11_51 | 69420 | 69929 | + | 3.D.9.1.1 |
| TC | MGYG000002082_11 | MGYG000002082_11_52 | 69944 | 70252 | + | 3.D.1.2.1 |
| TC | MGYG000002082_11 | MGYG000002082_11_53 | 70275 | 72170 | + | 3.D.9.1.1 |
| TC | MGYG000002082_11 | MGYG000002082_11_54 | 72184 | 73668 | + | 3.D.1.2.1 |
| TC | MGYG000002082_11 | MGYG000002082_11_55 | 73676 | 75103 | + | 3.D.1.8.1 |
| TC | MGYG000002082_11 | MGYG000002082_11_56 | 75207 | 77324 | - | 8.A.51.1.1 |
| NULL(UNKNOWN) | MGYG000002082_11 | MGYG000002082_11_57 | 77413 | 78099 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002082_11 | MGYG000002082_11_58 | 78125 | 79126 | - | GH73 |
| pfam | MGYG000002082_11 | MGYG000002082_11_59 | 79250 | 79855 | + | DUF4254 |
| CAZyme | MGYG000002082_11 | MGYG000002082_11_60 | 79839 | 80873 | + | GT9 |
Gene ID: MGYG000002082_11_46
Type: TC
Location: 65273 - 65623 (+)
Type: TC
Location: 65273 - 65623 (+)
Gene ID: MGYG000002082_11_47
Type: TC
Location: 65614 - 66270 (+)
Type: TC
Location: 65614 - 66270 (+)
Gene ID: MGYG000002082_11_48
Type: TC
Location: 66263 - 67882 (+)
Type: TC
Location: 66263 - 67882 (+)
Gene ID: MGYG000002082_11_49
Type: TC
Location: 67900 - 68976 (+)
Type: TC
Location: 67900 - 68976 (+)
Gene ID: MGYG000002082_11_50
Type: STP
Location: 68979 - 69416 (+)
Type: STP
Location: 68979 - 69416 (+)
Gene ID: MGYG000002082_11_51
Type: TC
Location: 69420 - 69929 (+)
Type: TC
Location: 69420 - 69929 (+)
Gene ID: MGYG000002082_11_52
Type: TC
Location: 69944 - 70252 (+)
Type: TC
Location: 69944 - 70252 (+)
Gene ID: MGYG000002082_11_53
Type: TC
Location: 70275 - 72170 (+)
Type: TC
Location: 70275 - 72170 (+)
Gene ID: MGYG000002082_11_54
Type: TC
Location: 72184 - 73668 (+)
Type: TC
Location: 72184 - 73668 (+)
Gene ID: MGYG000002082_11_55
Type: TC
Location: 73676 - 75103 (+)
Type: TC
Location: 73676 - 75103 (+)
Gene ID: MGYG000002082_11_56
Type: TC
Location: 75207 - 77324 (-)
Type: TC
Location: 75207 - 77324 (-)
Gene ID: MGYG000002082_11_57
Type:
Location: 77413 - 78099 (-)
Type:
Location: 77413 - 78099 (-)
Gene ID: MGYG000002082_11_58
Type: CAZyme
Location: 78125 - 79126 (-)
Type: CAZyme
Location: 78125 - 79126 (-)
Gene ID: MGYG000002082_11_59
Type: pfam
Location: 79250 - 79855 (+)
Type: pfam
Location: 79250 - 79855 (+)
Gene ID: MGYG000002082_11_60
Type: CAZyme
Location: 79839 - 80873 (+)
Type: CAZyme
Location: 79839 - 80873 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.