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Cluster: MGYG000002082_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002082_11 MGYG000002082_11_2 1139 4558 - GH2
TF MGYG000002082_11 MGYG000002082_11_3 4584 8522 - HTH_AraC
CAZyme MGYG000002082_11 MGYG000002082_11_4 8715 10376 + GH20
TC MGYG000002082_11 MGYG000002082_11_5 10496 13663 + 1.B.14.6.1
pfam MGYG000002082_11 MGYG000002082_11_6 13677 15497 + SusD_RagB | SusD-like_3
TC MGYG000002082_11 MGYG000002082_11_7 15528 18503 + 1.B.14.6.2
pfam MGYG000002082_11 MGYG000002082_11_8 18515 20146 + SusD_RagB | SusD-like_3
CAZyme MGYG000002082_11 MGYG000002082_11_9 20217 21098 + GH16_3
CAZyme MGYG000002082_11 MGYG000002082_11_10 21131 22627 + GH29
pfam MGYG000002082_11 MGYG000002082_11_11 22648 24405 + BACON | Laminin_G_3 | BACON_2
CAZyme MGYG000002082_11 MGYG000002082_11_12 24479 25252 + GH16_3
Gene ID: MGYG000002082_11_2
Type: CAZyme
Location: 1139 - 4558 (-)
Gene ID: MGYG000002082_11_3
Type: TF
Location: 4584 - 8522 (-)
Gene ID: MGYG000002082_11_4
Type: CAZyme
Location: 8715 - 10376 (+)
Gene ID: MGYG000002082_11_5
Type: TC
Location: 10496 - 13663 (+)
Gene ID: MGYG000002082_11_6
Type: pfam
Location: 13677 - 15497 (+)
Gene ID: MGYG000002082_11_7
Type: TC
Location: 15528 - 18503 (+)
Gene ID: MGYG000002082_11_8
Type: pfam
Location: 18515 - 20146 (+)
Gene ID: MGYG000002082_11_9
Type: CAZyme
Location: 20217 - 21098 (+)
Gene ID: MGYG000002082_11_10
Type: CAZyme
Location: 21131 - 22627 (+)
Gene ID: MGYG000002082_11_11
Type: pfam
Location: 22648 - 24405 (+)
Gene ID: MGYG000002082_11_12
Type: CAZyme
Location: 24479 - 25252 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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