Cluster: MGYG000002082_CGC20
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000002082
- CGC Family ID: CGCFAM_02291
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002082_8 | MGYG000002082_8_72 | 83867 | 87202 | + | 1.B.14.6.13 |
| TC | MGYG000002082_8 | MGYG000002082_8_73 | 87215 | 88780 | + | 8.A.46.2.2 |
| pfam | MGYG000002082_8 | MGYG000002082_8_74 | 88788 | 89723 | + | GH18_BT1044-like | GH18_BT1044-like |
| sulfatase | MGYG000002082_8 | MGYG000002082_8_75 | 89731 | 91044 | + | S1_48 |
| CAZyme | MGYG000002082_8 | MGYG000002082_8_76 | 91047 | 92669 | + | GH18 |
| NULL(UNKNOWN) | MGYG000002082_8 | MGYG000002082_8_77 | 92837 | 93409 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000002082_8 | MGYG000002082_8_78 | 93544 | 94092 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002082_8 | MGYG000002082_8_79 | 94495 | 96756 | - | GH92 |
| CAZyme | MGYG000002082_8 | MGYG000002082_8_80 | 96786 | 100325 | - | GH125 | GH92 |
| CAZyme | MGYG000002082_8 | MGYG000002082_8_81 | 100329 | 102587 | - | GH92 |
| CAZyme | MGYG000002082_8 | MGYG000002082_8_82 | 102587 | 103597 | - | GH130_2 |
| CAZyme | MGYG000002082_8 | MGYG000002082_8_83 | 103631 | 105829 | - | GH20 |
| pfam | MGYG000002082_8 | MGYG000002082_8_84 | 105996 | 107327 | - | F5_F8_type_C | DUF4989 |
| CAZyme | MGYG000002082_8 | MGYG000002082_8_85 | 107352 | 108785 | - | GH18 |
| sulfatase | MGYG000002082_8 | MGYG000002082_8_86 | 108817 | 109971 | - | S1_48 |
| pfam | MGYG000002082_8 | MGYG000002082_8_87 | 109980 | 111026 | - | GH18_BT1044-like |
| TC | MGYG000002082_8 | MGYG000002082_8_88 | 111047 | 112657 | - | 8.A.46.2.2 |
| TC | MGYG000002082_8 | MGYG000002082_8_89 | 112670 | 116047 | - | 1.B.14.6.13 |
Gene ID: MGYG000002082_8_72
Type: TC
Location: 83867 - 87202 (+)
Type: TC
Location: 83867 - 87202 (+)
Gene ID: MGYG000002082_8_73
Type: TC
Location: 87215 - 88780 (+)
Type: TC
Location: 87215 - 88780 (+)
Gene ID: MGYG000002082_8_74
Type: pfam
Location: 88788 - 89723 (+)
Type: pfam
Location: 88788 - 89723 (+)
Gene ID: MGYG000002082_8_75
Type: sulfatase
Location: 89731 - 91044 (+)
Type: sulfatase
Location: 89731 - 91044 (+)
Gene ID: MGYG000002082_8_76
Type: CAZyme
Location: 91047 - 92669 (+)
Type: CAZyme
Location: 91047 - 92669 (+)
Gene ID: MGYG000002082_8_77
Type:
Location: 92837 - 93409 (+)
Type:
Location: 92837 - 93409 (+)
Gene ID: MGYG000002082_8_78
Type:
Location: 93544 - 94092 (-)
Type:
Location: 93544 - 94092 (-)
Gene ID: MGYG000002082_8_79
Type: CAZyme
Location: 94495 - 96756 (-)
Type: CAZyme
Location: 94495 - 96756 (-)
Gene ID: MGYG000002082_8_80
Type: CAZyme
Location: 96786 - 100325 (-)
Type: CAZyme
Location: 96786 - 100325 (-)
Gene ID: MGYG000002082_8_81
Type: CAZyme
Location: 100329 - 102587 (-)
Type: CAZyme
Location: 100329 - 102587 (-)
Gene ID: MGYG000002082_8_82
Type: CAZyme
Location: 102587 - 103597 (-)
Type: CAZyme
Location: 102587 - 103597 (-)
Gene ID: MGYG000002082_8_83
Type: CAZyme
Location: 103631 - 105829 (-)
Type: CAZyme
Location: 103631 - 105829 (-)
Gene ID: MGYG000002082_8_84
Type: pfam
Location: 105996 - 107327 (-)
Type: pfam
Location: 105996 - 107327 (-)
Gene ID: MGYG000002082_8_85
Type: CAZyme
Location: 107352 - 108785 (-)
Type: CAZyme
Location: 107352 - 108785 (-)
Gene ID: MGYG000002082_8_86
Type: sulfatase
Location: 108817 - 109971 (-)
Type: sulfatase
Location: 108817 - 109971 (-)
Gene ID: MGYG000002082_8_87
Type: pfam
Location: 109980 - 111026 (-)
Type: pfam
Location: 109980 - 111026 (-)
Gene ID: MGYG000002082_8_88
Type: TC
Location: 111047 - 112657 (-)
Type: TC
Location: 111047 - 112657 (-)
Gene ID: MGYG000002082_8_89
Type: TC
Location: 112670 - 116047 (-)
Type: TC
Location: 112670 - 116047 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.