Cluster: MGYG000002082_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002082
- CGC Family ID: CGCFAM_00607
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002082_6 | MGYG000002082_6_4 | 2580 | 4487 | - | 4.C.1.1.14 |
| sulfatase | MGYG000002082_6 | MGYG000002082_6_5 | 4489 | 6279 | - | S1_97 |
| pfam | MGYG000002082_6 | MGYG000002082_6_6 | 6423 | 7580 | + | Orn_DAP_Arg_deC | Orn_Arg_deC_N |
| TC | MGYG000002082_6 | MGYG000002082_6_7 | 7587 | 8486 | + | 2.A.7.3.57 |
| pfam | MGYG000002082_6 | MGYG000002082_6_8 | 8597 | 11062 | + | tRNA_bind | FDX-ACB | B3_4 | B5 | tRNA_synthFbeta |
| CAZyme | MGYG000002082_6 | MGYG000002082_6_9 | 11259 | 13418 | - | GH20 |
Gene ID: MGYG000002082_6_4
Type: TC
Location: 2580 - 4487 (-)
Type: TC
Location: 2580 - 4487 (-)
Gene ID: MGYG000002082_6_5
Type: sulfatase
Location: 4489 - 6279 (-)
Type: sulfatase
Location: 4489 - 6279 (-)
Gene ID: MGYG000002082_6_6
Type: pfam
Location: 6423 - 7580 (+)
Type: pfam
Location: 6423 - 7580 (+)
Gene ID: MGYG000002082_6_7
Type: TC
Location: 7587 - 8486 (+)
Type: TC
Location: 7587 - 8486 (+)
Gene ID: MGYG000002082_6_8
Type: pfam
Location: 8597 - 11062 (+)
Type: pfam
Location: 8597 - 11062 (+)
Gene ID: MGYG000002082_6_9
Type: CAZyme
Location: 11259 - 13418 (-)
Type: CAZyme
Location: 11259 - 13418 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.