Cluster: MGYG000001956_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001956
- CGC Family ID: CGCFAM_00515
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001956_23 | MGYG000001956_23_11 | 9611 | 10549 | + | 1.A.35.1.3 |
| pfam | MGYG000001956_23 | MGYG000001956_23_12 | 10553 | 12712 | + | S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5 |
| CAZyme | MGYG000001956_23 | MGYG000001956_23_13 | 12828 | 14249 | - | GT5 |
| pfam | MGYG000001956_23 | MGYG000001956_23_14 | 14267 | 15391 | - | NTP_transferase | Hexapep_GlmU |
| pfam | MGYG000001956_23 | MGYG000001956_23_15 | 15397 | 16605 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | MGYG000001956_23 | MGYG000001956_23_16 | 16671 | 18545 | - | GH13_9 |
Gene ID: MGYG000001956_23_11
Type: TC
Location: 9611 - 10549 (+)
Type: TC
Location: 9611 - 10549 (+)
Gene ID: MGYG000001956_23_12
Type: pfam
Location: 10553 - 12712 (+)
Type: pfam
Location: 10553 - 12712 (+)
Gene ID: MGYG000001956_23_13
Type: CAZyme
Location: 12828 - 14249 (-)
Type: CAZyme
Location: 12828 - 14249 (-)
Gene ID: MGYG000001956_23_14
Type: pfam
Location: 14267 - 15391 (-)
Type: pfam
Location: 14267 - 15391 (-)
Gene ID: MGYG000001956_23_15
Type: pfam
Location: 15397 - 16605 (-)
Type: pfam
Location: 15397 - 16605 (-)
Gene ID: MGYG000001956_23_16
Type: CAZyme
Location: 16671 - 18545 (-)
Type: CAZyme
Location: 16671 - 18545 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900543795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001956_23_13 | vegetarian > omnivore | 1.10843 | 0.01479 |