Cluster: MGYG000001887_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001887
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001887_2 | MGYG000001887_2_113 | 116678 | 118543 | - | 3.A.1.135.5 |
| TC | MGYG000001887_2 | MGYG000001887_2_114 | 118536 | 120287 | - | 3.A.1.135.5 |
| pfam | MGYG000001887_2 | MGYG000001887_2_115 | 120476 | 121339 | + | PDH_N | NAD_binding_2 | PDH_C |
| NULL(UNKNOWN) | MGYG000001887_2 | MGYG000001887_2_116 | 121341 | 121895 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001887_2 | MGYG000001887_2_117 | 122118 | 124448 | + | GH95 |
Gene ID: MGYG000001887_2_113
Type: TC
Location: 116678 - 118543 (-)
Type: TC
Location: 116678 - 118543 (-)
Gene ID: MGYG000001887_2_114
Type: TC
Location: 118536 - 120287 (-)
Type: TC
Location: 118536 - 120287 (-)
Gene ID: MGYG000001887_2_115
Type: pfam
Location: 120476 - 121339 (+)
Type: pfam
Location: 120476 - 121339 (+)
Gene ID: MGYG000001887_2_116
Type:
Location: 121341 - 121895 (+)
Type:
Location: 121341 - 121895 (+)
Gene ID: MGYG000001887_2_117
Type: CAZyme
Location: 122118 - 124448 (+)
Type: CAZyme
Location: 122118 - 124448 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp003512525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.