Cluster: MGYG000001887_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001887
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001887_2 | MGYG000001887_2_45 | 55712 | 57763 | + | GH2 |
| NULL(UNKNOWN) | MGYG000001887_2 | MGYG000001887_2_46 | 57804 | 58622 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001887_2 | MGYG000001887_2_47 | 58514 | 58900 | - | Amidase_2 |
| TC | MGYG000001887_2 | MGYG000001887_2_48 | 58902 | 59315 | - | 1.E.19.1.7 |
Gene ID: MGYG000001887_2_45
Type: CAZyme
Location: 55712 - 57763 (+)
Type: CAZyme
Location: 55712 - 57763 (+)
Gene ID: MGYG000001887_2_46
Type:
Location: 57804 - 58622 (+)
Type:
Location: 57804 - 58622 (+)
Gene ID: MGYG000001887_2_47
Type: pfam
Location: 58514 - 58900 (-)
Type: pfam
Location: 58514 - 58900 (-)
Gene ID: MGYG000001887_2_48
Type: TC
Location: 58902 - 59315 (-)
Type: TC
Location: 58902 - 59315 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp003512525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001887_2_45 | vegetarian > vegan | 1.34186 | 0.02177 |