Cluster: MGYG000001887_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001887
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001887_2 | MGYG000001887_2_22 | 28535 | 29098 | - | 9.A.24.1.7 |
| pfam | MGYG000001887_2 | MGYG000001887_2_23 | 29154 | 29813 | + | DUF2461 |
| NULL(UNKNOWN) | MGYG000001887_2 | MGYG000001887_2_24 | 29854 | 30558 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001887_2 | MGYG000001887_2_25 | 30564 | 31739 | - | GH130_1 |
| NULL(UNKNOWN) | MGYG000001887_2 | MGYG000001887_2_26 | 31875 | 32474 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001887_2 | MGYG000001887_2_27 | 32510 | 33067 | - | 1.A.22.1.1 |
Gene ID: MGYG000001887_2_22
Type: TC
Location: 28535 - 29098 (-)
Type: TC
Location: 28535 - 29098 (-)
Gene ID: MGYG000001887_2_23
Type: pfam
Location: 29154 - 29813 (+)
Type: pfam
Location: 29154 - 29813 (+)
Gene ID: MGYG000001887_2_24
Type:
Location: 29854 - 30558 (-)
Type:
Location: 29854 - 30558 (-)
Gene ID: MGYG000001887_2_25
Type: CAZyme
Location: 30564 - 31739 (-)
Type: CAZyme
Location: 30564 - 31739 (-)
Gene ID: MGYG000001887_2_26
Type:
Location: 31875 - 32474 (-)
Type:
Location: 31875 - 32474 (-)
Gene ID: MGYG000001887_2_27
Type: TC
Location: 32510 - 33067 (-)
Type: TC
Location: 32510 - 33067 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp003512525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.