Cluster: MGYG000001887_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001887
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001887_44 | MGYG000001887_44_10 | 12548 | 13723 | + | GT4 |
| NULL(UNKNOWN) | MGYG000001887_44 | MGYG000001887_44_11 | 13710 | 15044 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001887_44 | MGYG000001887_44_12 | 15035 | 15826 | + | GT2 |
| pfam | MGYG000001887_44 | MGYG000001887_44_13 | 15993 | 17321 | + | ABC2_membrane |
| TC | MGYG000001887_44 | MGYG000001887_44_14 | 17336 | 18091 | + | 3.A.1.103.1 |
Gene ID: MGYG000001887_44_10
Type: CAZyme
Location: 12548 - 13723 (+)
Type: CAZyme
Location: 12548 - 13723 (+)
Gene ID: MGYG000001887_44_11
Type:
Location: 13710 - 15044 (+)
Type:
Location: 13710 - 15044 (+)
Gene ID: MGYG000001887_44_12
Type: CAZyme
Location: 15035 - 15826 (+)
Type: CAZyme
Location: 15035 - 15826 (+)
Gene ID: MGYG000001887_44_13
Type: pfam
Location: 15993 - 17321 (+)
Type: pfam
Location: 15993 - 17321 (+)
Gene ID: MGYG000001887_44_14
Type: TC
Location: 17336 - 18091 (+)
Type: TC
Location: 17336 - 18091 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp003512525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.