Cluster: MGYG000001887_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001887
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001887_43 | MGYG000001887_43_9 | 8305 | 10713 | - | 8.A.59.4.2 |
| pfam | MGYG000001887_43 | MGYG000001887_43_10 | 10909 | 12666 | - | Transketolase_N | TPP_enzyme_C | Transket_pyr | Transketolase_C | DXP_synthase_N | DXP_synthase_N |
| pfam | MGYG000001887_43 | MGYG000001887_43_11 | 12955 | 14547 | + | Big_2 |
| CAZyme | MGYG000001887_43 | MGYG000001887_43_12 | 14823 | 17507 | + | GH2 |
Gene ID: MGYG000001887_43_9
Type: TC
Location: 8305 - 10713 (-)
Type: TC
Location: 8305 - 10713 (-)
Gene ID: MGYG000001887_43_10
Type: pfam
Location: 10909 - 12666 (-)
Type: pfam
Location: 10909 - 12666 (-)
Gene ID: MGYG000001887_43_11
Type: pfam
Location: 12955 - 14547 (+)
Type: pfam
Location: 12955 - 14547 (+)
Gene ID: MGYG000001887_43_12
Type: CAZyme
Location: 14823 - 17507 (+)
Type: CAZyme
Location: 14823 - 17507 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp003512525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.