Cluster: MGYG000001887_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001887
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001887_16 | MGYG000001887_16_43 | 37870 | 39060 | + | GH27 |
| NULL(UNKNOWN) | MGYG000001887_16 | MGYG000001887_16_44 | 39060 | 39263 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001887_16 | MGYG000001887_16_45 | 39526 | 42765 | - | CBM23 | GH5_7 |
| peptidase | MGYG000001887_16 | MGYG000001887_16_46 | 43181 | 44281 | - | S09.UPW |
| pfam | MGYG000001887_16 | MGYG000001887_16_47 | 44294 | 45676 | - | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2 |
| TC | MGYG000001887_16 | MGYG000001887_16_48 | 45882 | 48203 | + | 3.A.5.2.2 |
Gene ID: MGYG000001887_16_43
Type: CAZyme
Location: 37870 - 39060 (+)
Type: CAZyme
Location: 37870 - 39060 (+)
Gene ID: MGYG000001887_16_44
Type:
Location: 39060 - 39263 (+)
Type:
Location: 39060 - 39263 (+)
Gene ID: MGYG000001887_16_45
Type: CAZyme
Location: 39526 - 42765 (-)
Type: CAZyme
Location: 39526 - 42765 (-)
Gene ID: MGYG000001887_16_46
Type: peptidase
Location: 43181 - 44281 (-)
Type: peptidase
Location: 43181 - 44281 (-)
Gene ID: MGYG000001887_16_47
Type: pfam
Location: 44294 - 45676 (-)
Type: pfam
Location: 44294 - 45676 (-)
Gene ID: MGYG000001887_16_48
Type: TC
Location: 45882 - 48203 (+)
Type: TC
Location: 45882 - 48203 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp003512525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.