Cluster: MGYG000001887_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001887
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001887_5 | MGYG000001887_5_2 | 1306 | 2703 | + | 2.A.2.3.3 |
| CAZyme | MGYG000001887_5 | MGYG000001887_5_3 | 2719 | 5718 | + | GH2 |
| pfam | MGYG000001887_5 | MGYG000001887_5_4 | 5734 | 7008 | + | GHMP_kinases_N | GalKase_gal_bdg |
| pfam | MGYG000001887_5 | MGYG000001887_5_5 | 7314 | 7547 | - | Smr |
| CAZyme | MGYG000001887_5 | MGYG000001887_5_6 | 8158 | 9450 | - | GH5_4 |
Gene ID: MGYG000001887_5_2
Type: TC
Location: 1306 - 2703 (+)
Type: TC
Location: 1306 - 2703 (+)
Gene ID: MGYG000001887_5_3
Type: CAZyme
Location: 2719 - 5718 (+)
Type: CAZyme
Location: 2719 - 5718 (+)
Gene ID: MGYG000001887_5_4
Type: pfam
Location: 5734 - 7008 (+)
Type: pfam
Location: 5734 - 7008 (+)
Gene ID: MGYG000001887_5_5
Type: pfam
Location: 7314 - 7547 (-)
Type: pfam
Location: 7314 - 7547 (-)
Gene ID: MGYG000001887_5_6
Type: CAZyme
Location: 8158 - 9450 (-)
Type: CAZyme
Location: 8158 - 9450 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp003512525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.