Cluster: MGYG000001279_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001279
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001279_63 | MGYG000001279_63_4 | 1662 | 3074 | - | GH23 |
| pfam | MGYG000001279_63 | MGYG000001279_63_5 | 3228 | 4034 | + | TatD_DNase |
| TC | MGYG000001279_63 | MGYG000001279_63_6 | 4132 | 5610 | + | 1.B.52.2.1 |
Gene ID: MGYG000001279_63_4
Type: CAZyme
Location: 1662 - 3074 (-)
Type: CAZyme
Location: 1662 - 3074 (-)
Gene ID: MGYG000001279_63_5
Type: pfam
Location: 3228 - 4034 (+)
Type: pfam
Location: 3228 - 4034 (+)
Gene ID: MGYG000001279_63_6
Type: TC
Location: 4132 - 5610 (+)
Type: TC
Location: 4132 - 5610 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E fulva
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.