Cluster: MGYG000001279_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001279
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001279_17 | MGYG000001279_17_16 | 15743 | 18478 | - | 3.A.5.1.1 |
| NULL(UNKNOWN) | MGYG000001279_17 | MGYG000001279_17_17 | 18520 | 18639 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001279_17 | MGYG000001279_17_18 | 18832 | 19287 | + | DciA |
| CAZyme | MGYG000001279_17 | MGYG000001279_17_19 | 19679 | 20590 | - | CE11 |
Gene ID: MGYG000001279_17_16
Type: TC
Location: 15743 - 18478 (-)
Type: TC
Location: 15743 - 18478 (-)
Gene ID: MGYG000001279_17_17
Type:
Location: 18520 - 18639 (+)
Type:
Location: 18520 - 18639 (+)
Gene ID: MGYG000001279_17_18
Type: pfam
Location: 18832 - 19287 (+)
Type: pfam
Location: 18832 - 19287 (+)
Gene ID: MGYG000001279_17_19
Type: CAZyme
Location: 19679 - 20590 (-)
Type: CAZyme
Location: 19679 - 20590 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E fulva
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.