Cluster: MGYG000001279_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001279
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001279_265 | MGYG000001279_265_1 | 1 | 417 | - | 2.A.1.6.2 |
| TF | MGYG000001279_265 | MGYG000001279_265_2 | 660 | 1994 | - | HTH_8 |
| STP | MGYG000001279_265 | MGYG000001279_265_3 | 1988 | 3805 | - | HATPase_c | HisKA | dCache_1 |
| CAZyme | MGYG000001279_265 | MGYG000001279_265_4 | 3850 | 6126 | - | GH3 |
Gene ID: MGYG000001279_265_1
Type: TC
Location: 1 - 417 (-)
Type: TC
Location: 1 - 417 (-)
Gene ID: MGYG000001279_265_2
Type: TF
Location: 660 - 1994 (-)
Type: TF
Location: 660 - 1994 (-)
Gene ID: MGYG000001279_265_3
Type: STP
Location: 1988 - 3805 (-)
Type: STP
Location: 1988 - 3805 (-)
Gene ID: MGYG000001279_265_4
Type: CAZyme
Location: 3850 - 6126 (-)
Type: CAZyme
Location: 3850 - 6126 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E fulva
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.