Cluster: MGYG000001279_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001279
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001279_141 | MGYG000001279_141_4 | 3119 | 4303 | - | GT4 |
| TC | MGYG000001279_141 | MGYG000001279_141_5 | 4406 | 6280 | - | 1.B.52.2.1 |
| pfam | MGYG000001279_141 | MGYG000001279_141_6 | 6511 | 7923 | + | HerA_C |
| TC | MGYG000001279_141 | MGYG000001279_141_7 | 7990 | 9462 | - | 2.A.20.1.1 |
Gene ID: MGYG000001279_141_4
Type: CAZyme
Location: 3119 - 4303 (-)
Type: CAZyme
Location: 3119 - 4303 (-)
Gene ID: MGYG000001279_141_5
Type: TC
Location: 4406 - 6280 (-)
Type: TC
Location: 4406 - 6280 (-)
Gene ID: MGYG000001279_141_6
Type: pfam
Location: 6511 - 7923 (+)
Type: pfam
Location: 6511 - 7923 (+)
Gene ID: MGYG000001279_141_7
Type: TC
Location: 7990 - 9462 (-)
Type: TC
Location: 7990 - 9462 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E fulva
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.