Cluster: MGYG000001279_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001279
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001279_137 | MGYG000001279_137_2 | 412 | 2478 | + | GH13_33 |
| pfam | MGYG000001279_137 | MGYG000001279_137_3 | 2555 | 3178 | + | Lum_binding | Lum_binding |
| pfam | MGYG000001279_137 | MGYG000001279_137_4 | 3194 | 3895 | + | DUF1275 |
| TC | MGYG000001279_137 | MGYG000001279_137_5 | 3896 | 5398 | - | 2.A.1.6.4 |
Gene ID: MGYG000001279_137_2
Type: CAZyme
Location: 412 - 2478 (+)
Type: CAZyme
Location: 412 - 2478 (+)
Gene ID: MGYG000001279_137_3
Type: pfam
Location: 2555 - 3178 (+)
Type: pfam
Location: 2555 - 3178 (+)
Gene ID: MGYG000001279_137_4
Type: pfam
Location: 3194 - 3895 (+)
Type: pfam
Location: 3194 - 3895 (+)
Gene ID: MGYG000001279_137_5
Type: TC
Location: 3896 - 5398 (-)
Type: TC
Location: 3896 - 5398 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E fulva
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.